Transcript Information: R_Transcript_31468.p2


Annotated TAIR IDAT5G15390.1
Annotated Gene NametRNA/rRNA methyltransferase (SpoU) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4995333-4997255 | Forward length=350
E-Value7.7E-88
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8155907080485
Replicate 24.9821729801385
Replicate 32.5883319317686
Condition 2: 8 Hour
Replicate 12.7667644008187
Replicate 23.2846493100047
Replicate 32.5637868107891
Condition 3: 24 Hour
Replicate 13.631743516247
Replicate 24.6104213500077
Replicate 33.9570991524334


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31468.p2 GENE.R_Transcript_31468~~R_Transcript_31468.p2 ORF type:complete len:177 (+),score=33.50,SpoU_methylase|PF00588.15|2e-24 R_Transcript_31468:611-1141(+)
ATGTCGTTTCTTGCGACAGCTCCAAAAGGTTGGGGAAACAGGTACAGAGATAATCGGCATGTTAGCATGGGTGCAGAGAAGTGGCTGGACATTGAAGTGTGGAACTCCACTAAAGAATGCTTTGATGTTTTGAGATCACGTGGATACAGAATTGCTACAACACATCTAGGAAAAGATTCGGTGTCTATTTATGACATGGATTGGTCTTGTCCAACTGCCATTATTGTTGGGAATGAGAACAAGGGAATTAGTGATGAGGCTTTAGAGTTATCGGATTTGCACTGCAGTATTCCAATGCAGGGCATGGTCGATTCTTTTAATGTTTCAGTTGCTGCGGGTTTGCTTATGCATCATGCTGTTTGTGACCGAACGTCGCGCCTGGGTTCTCATGGTGATCTAACGTCAGAAGAAAGTCAAATTCTTCTTGCTGAATTTTCACTTCGTCACAGCAACAGTGCAATAAGCATTGCTTGTGAGTATGCAAAAGCCCCCCATCCCCGTACCAAAGCTATGATGGATGACATGGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31468.p2 GENE.R_Transcript_31468~~R_Transcript_31468.p2 ORF type:complete len:177 (+),score=33.50,SpoU_methylase|PF00588.15|2e-24 R_Transcript_31468:611-1141(+)
MSFLATAPKGWGNRYRDNRHVSMGAEKWLDIEVWNSTKECFDVLRSRGYRIATTHLGKDSVSIYDMDWSCPTAIIVGNENKGISDEALELSDLHCSIPMQGMVDSFNVSVAAGLLMHHAVCDRTSRLGSHGDLTSEESQILLAEFSLRHSNSAISIACEYAKAPHPRTKAMMDDMG*

Click here to download the sequence:
Link to NCBI Protein BLAST