Transcript Information: R_Transcript_31469.p2


Annotated TAIR IDAT5G15390.1
Annotated Gene NametRNA/rRNA methyltransferase (SpoU) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4995333-4997255 | Forward length=350
E-Value3.8E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41721053610786
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 12.3786268805895
Replicate 21.1499882089753
Replicate 30.10372348925935
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.87550818747589


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31469.p2 GENE.R_Transcript_31469~~R_Transcript_31469.p2 ORF type:complete len:175 (+),score=33.62,SpoU_methylase|PF00588.15|1.9e-24 R_Transcript_31469:570-1094(+)
ATGTCGTTTCTTGCGACAGCTCCAAAAGGTTGGGGAAACAGGTACAGAGATAATCGGCATGTTAGCATGGGTGCAGAGAAGTGGCTGGACATTGAAGTGTGGAACTCCACTAAAGAATGCTTTGATGTTTTGAGATCACGTGGATACAGAATTGCTACAACACATCTAGGAAAAGATTCGGTGTCTATTTATGACATGGATTGGTCTTGTCCAACTGCCATTATTGTTGGGAATGAGAACAAGGGAATTAGTGATGAGGCTTTAGAGTTATCGGATTTGCACTGCAGTATTCCAATGCAGGGCATGGTCGATTCTTTTAATGTTTCAGTTGCTGCGGGTTTGCTTATGCATCATGCTGTTTGTGACCGAACGTCGCGCCTGGGTTCTCATGGTGATCTAACCTCAGAAGAATATCAAATTCTTCTTGCTGAATTTTCACTTCGTCACAGCAACAGTGCAATAAGCATTGCTTGTGAGTATGCAAAAAGGAAGCCGCCATTTCCACACCAAAGCTATGATGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31469.p2 GENE.R_Transcript_31469~~R_Transcript_31469.p2 ORF type:complete len:175 (+),score=33.62,SpoU_methylase|PF00588.15|1.9e-24 R_Transcript_31469:570-1094(+)
MSFLATAPKGWGNRYRDNRHVSMGAEKWLDIEVWNSTKECFDVLRSRGYRIATTHLGKDSVSIYDMDWSCPTAIIVGNENKGISDEALELSDLHCSIPMQGMVDSFNVSVAAGLLMHHAVCDRTSRLGSHGDLTSEEYQILLAEFSLRHSNSAISIACEYAKRKPPFPHQSYDG*

Click here to download the sequence:
Link to NCBI Protein BLAST