Transcript Information: R_Transcript_31471.p1


Annotated TAIR IDAT5G15390.1
Annotated Gene NametRNA/rRNA methyltransferase (SpoU) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4995333-4997255 | Forward length=350
E-Value4.5E-140
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9322123102836
Replicate 23.4993834027163
Replicate 35.2812756124463
Condition 2: 8 Hour
Replicate 15.1012218640094
Replicate 23.6025865188577
Replicate 37.1093808263182
Condition 3: 24 Hour
Replicate 16.0583102406441
Replicate 24.8399040343211
Replicate 36.2623155076401


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31471.p1 GENE.R_Transcript_31471~~R_Transcript_31471.p1 ORF type:5prime_partial len:360 (+),score=49.83,SpoU_methylase|PF00588.15|6.7e-33 R_Transcript_31471:2-1081(+)
TGGTATAGCCTTGGGTCTCCTTCTTTCTCGCACACCACCATGAGCCTATGCAGCATCCTTACTCGAACCTCACTTTCTCCTTTCCAACCCTCTCTCAACCCCAATCACTGCTCCCATTTCCCCACATTAGGTTTCCACTTCAAGCAACGTTACCAACACCACTGCCCCAAATTCCAATGCACACCTTACACCTCACTTGCTCAATTGATCCTCGAACCATCCGAAGACCTCTCAAAAGACACAGTAGAACACCTTCTCTCTCCTCAAAACAAGGATGCCATCTCAAGACTAATGAAAATGGACCGAAAATCCACTAAAATTGCTAAACCCTCTTCTGGGCGTTGGTTTCCTTATCTTGATAACTTCAATCCAGGTGGTATTCCTTTGAGTAGTAAAGAGGTCATTGAGGCCTTAGAGCCTCATATACTGGATGTTCGGAAAGAGAGATTTAGGAATGTGGTGAGAAATCGGAGTTACGCTGTTTGTCTTGTCGTTGAAGGATTGACTGATTTCGGAAACGTTTCGGCCACGTTTCGCTCCGCTGATGCTCTAGGGTTTCAGTCTGTTCATGTCGTTTCTTGCGACAGCTCCAAAAGGTACAGAGATAATCGGCATGTTAGCATGGGTGCAGAGAAGTGGCTGGACATTGAAGTGTGGAACTCCACTAAAGAATGCTTTGATGTTTTGAGATCACGTGGATACAGAATTGCTACAACACATCTAGGAAAAGATTCGGTGTCTATTTATGACATGGATTGGTCTTGTCCAACTGCCATTATTGTTGGGAATGAGAACAAGGGAATTAGTGATGAGGCTTTAGAGTTATCGGATTTGCACTGCAGTATTCCAATGCAGGGCATGGTCGATTCTTTTAATGTTTCAGTTGCTGCGGGTTTGCTTATGCATCATGCTGTTTGTGACCGAACGTCGCGCCTGGGTTCTCATGGTGATCTAACCTCAGAAGAATATCAAATTCTTCTTGCTGAATTTTCACTTCGTCACAGCAACAGTGCAATAAGCATTGCTTGTGAGTATGCAAAAAGGAAGCCGCCATTTCCACACCAAAGCTATGATGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31471.p1 GENE.R_Transcript_31471~~R_Transcript_31471.p1 ORF type:5prime_partial len:360 (+),score=49.83,SpoU_methylase|PF00588.15|6.7e-33 R_Transcript_31471:2-1081(+)
WYSLGSPSFSHTTMSLCSILTRTSLSPFQPSLNPNHCSHFPTLGFHFKQRYQHHCPKFQCTPYTSLAQLILEPSEDLSKDTVEHLLSPQNKDAISRLMKMDRKSTKIAKPSSGRWFPYLDNFNPGGIPLSSKEVIEALEPHILDVRKERFRNVVRNRSYAVCLVVEGLTDFGNVSATFRSADALGFQSVHVVSCDSSKRYRDNRHVSMGAEKWLDIEVWNSTKECFDVLRSRGYRIATTHLGKDSVSIYDMDWSCPTAIIVGNENKGISDEALELSDLHCSIPMQGMVDSFNVSVAAGLLMHHAVCDRTSRLGSHGDLTSEEYQILLAEFSLRHSNSAISIACEYAKRKPPFPHQSYDG*

Click here to download the sequence:
Link to NCBI Protein BLAST