Transcript Information: R_Transcript_31473.p1


Annotated TAIR IDAT5G15390.1
Annotated Gene NametRNA/rRNA methyltransferase (SpoU) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4995333-4997255 | Forward length=350
E-Value6E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3107179408974
Replicate 21.0609832657172
Replicate 32.1931982804827
Condition 2: 8 Hour
Replicate 11.3024396248535
Replicate 22.081465065004
Replicate 33.4758403315635
Condition 3: 24 Hour
Replicate 12.0149139322187
Replicate 21.9357009132687
Replicate 31.9792073387088


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31473.p1 GENE.R_Transcript_31473~~R_Transcript_31473.p1 ORF type:5prime_partial len:376 (+),score=49.72,SpoU_methylase|PF00588.15|7.3e-33 R_Transcript_31473:1-1128(+)
GCACCAGCCATTTCTTTTCCTCTACCCCTCCTTACATTACACTGGTACAGCCTTGGGTCTCTTTCTTTCTCGCACACCATCATGAGCCTATGCAGCATCTTTGCTCGAACCTCACTCTCTCCTTTCCAACCCTCTCTCAACCCCAATCACTGCTCCCATTTCCCCAAATTAGGTTTCCACTTCGAGCAACATTATCAACACCACTGCCCCAAATTCCAATGCACACCTTACACCTCACTTGCTCAATTGATCCTCGAACCATCCGAAGACCTCTCAAAAGACACAGTAGAACACCTTCTCTCTCCTCAAAACAAGGATGCCATCTCAAGACTAATGAAAATGGACCGAAAATCCACTAAAATTGCTAAACCCTCTTCTGGGCGTTGGTTTCCTTATCTTGATAACTTCAATGCAGGTGGTAAATTTTTGAGTAGTAAAGAGGTCATTGAGGCCTTAGAGCCTCATATACTGGATGTTCGGAAAGAGAGATTTAGGAATGTGGTGAGAAATCGGAGTTACGCTGTTTGTCTTGTCGTTGAAGGATTGACTGATTTCGGAAACGTTTCGGCCACGTTTCGCTCCGCTGATGCTCTAGGGTTTCAGTCTGTTCATGTCGTTTCTTGCGACAGCTCCAAAAGGTACAGAGATAATCGGCATGTTAGCATGGGTGCAGAGAAGTGGCTGGACATTGAAGTGTGGAACTCCACTAAAGAATGCTTTGATGTTTTGAGATCACGTGGATACAGAATTGCTACAACACATCTAGGAAAAGATTCGGTGTCTATTTATGACATGGATTGGTCTTGTCCAACTGCCATTATTGTTGGGAATGAGAACAAGGGAATTAGTGATGAGGCTTTAGAGTTATCGGATTTGCACTGCAGTATTCCAATGCAGGGCATGGTCGATTCTTTTAATGTTTCAGTTGCTGCGGGTTTGCTTATGCATCATGCTGTTTGTGACCGAACGTCGCGCCTGGGTTCTCATGGTGATCTAACGTCAGAAGAAAGTCAAATTCTTCTTGCTGAATTTTCACTTCGTCACAGCAACAGTGCAATAAGCATTGCTTGTGAGTATGCAAAAGCCCCCCATCCCCGTACCAAAGCTATGATGGATGACATGGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31473.p1 GENE.R_Transcript_31473~~R_Transcript_31473.p1 ORF type:5prime_partial len:376 (+),score=49.72,SpoU_methylase|PF00588.15|7.3e-33 R_Transcript_31473:1-1128(+)
APAISFPLPLLTLHWYSLGSLSFSHTIMSLCSIFARTSLSPFQPSLNPNHCSHFPKLGFHFEQHYQHHCPKFQCTPYTSLAQLILEPSEDLSKDTVEHLLSPQNKDAISRLMKMDRKSTKIAKPSSGRWFPYLDNFNAGGKFLSSKEVIEALEPHILDVRKERFRNVVRNRSYAVCLVVEGLTDFGNVSATFRSADALGFQSVHVVSCDSSKRYRDNRHVSMGAEKWLDIEVWNSTKECFDVLRSRGYRIATTHLGKDSVSIYDMDWSCPTAIIVGNENKGISDEALELSDLHCSIPMQGMVDSFNVSVAAGLLMHHAVCDRTSRLGSHGDLTSEESQILLAEFSLRHSNSAISIACEYAKAPHPRTKAMMDDMG*

Click here to download the sequence:
Link to NCBI Protein BLAST