Transcript Information: R_Transcript_314841.p1


Annotated TAIR IDAT1G52620.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19603828-19606287 | Forward length=819
E-Value9E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.56723783188709
Condition 3: 24 Hour
Replicate 10.23914382528858
Replicate 20
Replicate 30.45599384764369


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_314841.p1 GENE.R_Transcript_314841~~R_Transcript_314841.p1 ORF type:internal len:96 (+),score=15.99,PPR_2|PF13041.2|3.1,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|1.8e-09,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|0.37,PPR|PF01535.16|0.0018,PPR|PF01535.16|1.9e+03 R_Transcript_314841:1-285(+)
GTGTTAAGTTGCATGAAAAGTCATGGTCTTTTGCCTACTATTGAAGCTTTTGATATGTTAATTAGAGCTTATGCTGATGCATTGTTGGTTGATAAAGCTAGGGACTTGTATGAATTTGTGAGGGGTACATTTTGTTGTATGCCTAGTGCTATTGCTTGTAATTCCTTACTTATTGCTTTGGTAGAAAAGGGTCAATTTGCGGTTGCACATCAGGTGTATGATGAAATGCTTGAGAGAGATTGTTTAGATAACTATAGTACTTGTATAATGGTGAGGGGTTTTTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_314841.p1 GENE.R_Transcript_314841~~R_Transcript_314841.p1 ORF type:internal len:96 (+),score=15.99,PPR_2|PF13041.2|3.1,PPR_2|PF13041.2|2.8,PPR_2|PF13041.2|1.8e-09,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|0.37,PPR|PF01535.16|0.0018,PPR|PF01535.16|1.9e+03 R_Transcript_314841:1-285(+)
VLSCMKSHGLLPTIEAFDMLIRAYADALLVDKARDLYEFVRGTFCCMPSAIACNSLLIALVEKGQFAVAHQVYDEMLERDCLDNYSTCIMVRGFC

Click here to download the sequence:
Link to NCBI Protein BLAST