Transcript Information: R_Transcript_314999.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value0.001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34224301790098
Replicate 20.13122687760186
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.97828858055187
Replicate 30.22689513275484
Condition 3: 24 Hour
Replicate 10
Replicate 20.13784536806611
Replicate 30.54719261717243


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_314999.p1 GENE.R_Transcript_314999~~R_Transcript_314999.p1 ORF type:5prime_partial len:160 (+),score=26.94 R_Transcript_314999:2-481(+)
GCATTAGAGTTCTCTAACAAAACTGTAAAACAACTTGAGGATCAGCTTGCCTTTTGCAAGAACATACAAGATGATCAACTTTCTTCTAGTAAACTCGAGTTTGAGGAACGTCTGGAAGACATGAAAGCGGAGCTACAAAAGATGGAAGATCAACTTTCATCGGTGAAAAATGAGTTGCATTTAACCAACATCCAGTTGAAGTCGTCATTAGAAAAGTCCACAATTCAAAAGAAGCTATATCGATTGCTCACTTCTATGTTACAGACGATTAGTAGGGCTGGTAGCACACACAGCAAAGATTCATTGTTGCCATTCAAAGAATTGGATACTTCAATCTACACTCTCCCAATAACTACTCAAGAATTTCCTGATTCAATGAGGACCTTACAAATCATATCTAGTAGTACAAGTGAACAAGATATTCAAGGACAATCGTCAGATGAAATGGAATTGGTAGTGGATTATATATACTCAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_314999.p1 GENE.R_Transcript_314999~~R_Transcript_314999.p1 ORF type:5prime_partial len:160 (+),score=26.94 R_Transcript_314999:2-481(+)
ALEFSNKTVKQLEDQLAFCKNIQDDQLSSSKLEFEERLEDMKAELQKMEDQLSSVKNELHLTNIQLKSSLEKSTIQKKLYRLLTSMLQTISRAGSTHSKDSLLPFKELDTSIYTLPITTQEFPDSMRTLQIISSSTSEQDIQGQSSDEMELVVDYIYSR*

Click here to download the sequence:
Link to NCBI Protein BLAST