Transcript Information: R_Transcript_315021.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value2E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59109329516576
Replicate 20.3535646443159
Replicate 30.2670474590225
Condition 2: 8 Hour
Replicate 10.57091394954717
Replicate 20.23171898281021
Replicate 31.2226473474872
Condition 3: 24 Hour
Replicate 10.50554756848571
Replicate 20.31425887020253
Replicate 30.96396626859392


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_315021.p1 GENE.R_Transcript_315021~~R_Transcript_315021.p1 ORF type:5prime_partial len:772 (+),score=60.46,RVT_1|PF00078.23|4.5e-26,zf-RVT|PF13966.2|2.9e-16,RVT_3|PF13456.2|8.1e-06 R_Transcript_315021:1-2316(+)
CGCTCTAAACCTTTGATGGCCATTAAGGTGGACTTAGAGAAGGCTTATGATCGCATACGGTGGGACTTCCTTCGTGATACTCTCATGGAAGTTCGGTTACCCCAAAACCTGATTTCAGTTATTATGAATTGTGTCACGTGCTGCTCAATGCGTATACTTTGGAATGGTGCTATGACGGAATCGTTCCATCCAACGCAAGGGTTGCGGCAAGGAGACCCGCTCTCCCCGTACCTGTTTGTCCTCTGTATGGAGCGACTCTCGCATGTTATTGAGGAGGCCGTGGCAAGGGGTACTTGGAAACCAATTTCGGTTTGTCGCGAGGGCCCTGCTATTTCACATCTTTTCTTCGCAGATGACCTAGTGTTCTTTGGTGAAGCCACGATCGATCAAGCGACAGTCATGTCGGACTGCCTACAGCGGTTTTGTGAGGTCTCGGGCAAAAGGGTCAGTCATGCCAAGTCTCGGGTTCTCTTATCCACAGGTGCAAGTTCTGGGCTAGCTGGAGAGATCAGTGCCACTTTGAACATCCCAGTGACCGAAGATCTCGGTAAATATCTTGGGGTTCCTACAGTCCAGGGCCGAGTTACTAGAGATATGTATAGACATATCTTGGATAAGGTAGCTGATAGGCTCTCTGGGTGGAGAGCCAAATACCTGTCATTTGCGGGGCGTGTCACCCTTGCACAATCTGCCTTGGCGTGCCTCCCTTATTACACCATGCAAACTACACTGTTGCCACGCTCTATCTGCGACGATATTGACAAACGATGCCGAGGGTTTATCTGGGGGTCCACCGAGGTCAAGAAGAAAATCCATCTTGTTCGTTGGGAGGAAGTTAATAAACCCAAGGTACAAGGTGGACTGGGGATACCCTCAATGAGGCAATCCAATACGGCATTCCTTGCTAAGTTGGGGTGGCGAATTCTCAATGAGCCTGAAAGTCTATGGTCACGGGTGCTTCGCCACAAATACTGTAATGGCCGTCGAGACATCGATATGTTTCACCCATCAAGAAACAGTTCTCATACTTGGAAAGGAGTTGTTCATGGCGCCGCTACTTTGAGAGCAGGGGTTCGGAGCATTATAGGGGATGGAACTCGCACCTTTTTCTGGTTGCATCGATGGGCAGGGGACAAACCTCTCATCGAGCTTGTGTCGAGCCCACTTGATGAACAAACAAAACATATGACCGTTGCGGAGTATTGGGTAAATGGTGGGTGGGATTGGGTTGCCTTTGCACATCTCCTCCCCCCTTACTGTCTGGAGGCCATAGCAGCTCATAGCGTATCTGCCTCGGATAACACTGATGATGGTTACACGTGGGGGATGTCTAGCTCAGGCCAATTCTCCATCTCGTCAGCTAGGGATATTATCAGGGGAGAAGGCACCTCGCACCCCGACCCTACATGGAAATTGCTGTGGAAAGTCAAGTGCCCACAAAGGGCTCGGGCCTTTCTCTGGCTTGCCCTTCATAATGCTTTCTTGAGCAATGAGAACAAGGTGCGTCGCCACTTGGCGGTAAGCCCTGCATGTATGGAGTGTGGGACACCTCTGGAATCTTGCATCCACATTGTCCGCGACTGCCCCCGAGCAATTGAGGTATGGAATAGATTATGCCAACCTATCCCGACGCATGAGTTCTATAACCTGCCAATGAGGGATTGGCTGCATGTTAACCTTAAACAAAGTGGTAGCTGGCCGACGTATTTCGCACTTGCTGTTTGGTGGTTTTGGAGGTGGCGTAACTCACGCGTTTTTGGAGATATACAGGATATCCCGCTGGACAGGGTGGCTTTCCTCCACAATAAAGCCAAGGAGTACTTGACAGTGGATGAGCGCAAGTCTATTGGGCTTCTCGGAACAAAGAGGCAGCGGGTGGAAGCAACTGTCTCGTGGGCCACTCCACCGGATGGTTGGGTAAAACTCAATACCGATGGGGTTTCGAAGGGCAATCCAGGGCTAGCTGGCAGTGGTGGCATTTTTCGAGCTTCAAATGGGGCCTTTATCCGGGCCTTCACGTTCCGGTGTGGTAGCTGTTCCTCTGTTCGAGCTGAATTATTTGCTGCGCTCAAAGGACTTATGTTGGCTCGAGATATGCACATCCCCAAGCTAATTCTTGAAGTAGATTCTGAGGTTGTGCAGAAAGCTCTATTCATTGACCCTGCTCCGTGGCATCCTCATCGACATATGATCCTCCAATGTCGTGCTCTGCTATGCAAAGATGACTGGAAGTCCGAGTTCACCATGTTTTTCGAGAAGCCAACAGAGCCGTTGACTGGCTCGCCAATGACAGCCTCAATAATGGATGTACTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_315021.p1 GENE.R_Transcript_315021~~R_Transcript_315021.p1 ORF type:5prime_partial len:772 (+),score=60.46,RVT_1|PF00078.23|4.5e-26,zf-RVT|PF13966.2|2.9e-16,RVT_3|PF13456.2|8.1e-06 R_Transcript_315021:1-2316(+)
RSKPLMAIKVDLEKAYDRIRWDFLRDTLMEVRLPQNLISVIMNCVTCCSMRILWNGAMTESFHPTQGLRQGDPLSPYLFVLCMERLSHVIEEAVARGTWKPISVCREGPAISHLFFADDLVFFGEATIDQATVMSDCLQRFCEVSGKRVSHAKSRVLLSTGASSGLAGEISATLNIPVTEDLGKYLGVPTVQGRVTRDMYRHILDKVADRLSGWRAKYLSFAGRVTLAQSALACLPYYTMQTTLLPRSICDDIDKRCRGFIWGSTEVKKKIHLVRWEEVNKPKVQGGLGIPSMRQSNTAFLAKLGWRILNEPESLWSRVLRHKYCNGRRDIDMFHPSRNSSHTWKGVVHGAATLRAGVRSIIGDGTRTFFWLHRWAGDKPLIELVSSPLDEQTKHMTVAEYWVNGGWDWVAFAHLLPPYCLEAIAAHSVSASDNTDDGYTWGMSSSGQFSISSARDIIRGEGTSHPDPTWKLLWKVKCPQRARAFLWLALHNAFLSNENKVRRHLAVSPACMECGTPLESCIHIVRDCPRAIEVWNRLCQPIPTHEFYNLPMRDWLHVNLKQSGSWPTYFALAVWWFWRWRNSRVFGDIQDIPLDRVAFLHNKAKEYLTVDERKSIGLLGTKRQRVEATVSWATPPDGWVKLNTDGVSKGNPGLAGSGGIFRASNGAFIRAFTFRCGSCSSVRAELFAALKGLMLARDMHIPKLILEVDSEVVQKALFIDPAPWHPHRHMILQCRALLCKDDWKSEFTMFFEKPTEPLTGSPMTASIMDVL*

Click here to download the sequence:
Link to NCBI Protein BLAST