Transcript Information: R_Transcript_315296.p1


Annotated TAIR IDAT3G58100.1
Annotated Gene Nameplasmodesmata callose-binding protein 5
Annotated Gene Symbol(s)PDCB5
Annotation TypeOrtholog
Chromosome Positionchr3:21515397-21516329 | Reverse length=180
E-Value7.8E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.76054003977995
Replicate 20.99982382934753
Replicate 30.54539851419411
Condition 2: 8 Hour
Replicate 11.0202443728019
Replicate 20
Replicate 30.54022650655914
Condition 3: 24 Hour
Replicate 10
Replicate 21.0502504233608
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_315296.p1 GENE.R_Transcript_315296~~R_Transcript_315296.p1 ORF type:3prime_partial len:168 (+),score=34.46,X8|PF07983.9|1.6e-18,X8|PF07983.9|1.6e+04 R_Transcript_315296:230-730(+)
ATGGCAAACTCCTTTTTGTTCACTTTTATTACTACCCTTTTTACCCTCTTCATTGTATCCACCTCTGAAAACAGTGGTGCAGTGATTCAGCAACAGATGCTATGGTGTGTTGCCAAGAACAATGCTGAAGACTCAGCCCTGCAGCAGGCCTTGGACTGGGCTTGTGGGCCTGGTGGGGCTGATTGTGGACCGATTCAACAAGGTGGGCCTTGTTATGATACCAATGACTTGATTGGTATGGCTTCTTATGCTTTCAATGATTATTGTCTTAAGCATGGCATGACTGATGATACTTGCAACTTTAGTAACACTGCTGCTCTTACTGCTCTTGACCCTAGTCATGATAAGTGTAAATTTGCATCAAGGTTTAAGGAGTTGAAGATACTATGGCAGAATGCGAGTTTTGCAATTTTATGGTGCACTTGGCTAGAGAGGAATGCGTGGTTGTTCCGTGACATAGCTCTTTCGCAGGATATGTTGTGGGATAAAGTTACTTTTTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_315296.p1 GENE.R_Transcript_315296~~R_Transcript_315296.p1 ORF type:3prime_partial len:168 (+),score=34.46,X8|PF07983.9|1.6e-18,X8|PF07983.9|1.6e+04 R_Transcript_315296:230-730(+)
MANSFLFTFITTLFTLFIVSTSENSGAVIQQQMLWCVAKNNAEDSALQQALDWACGPGGADCGPIQQGGPCYDTNDLIGMASYAFNDYCLKHGMTDDTCNFSNTAALTALDPSHDKCKFASRFKELKILWQNASFAILWCTWLERNAWLFRDIALSQDMLWDKVTFL

Click here to download the sequence:
Link to NCBI Protein BLAST