Transcript Information: R_Transcript_315297.p1


Annotated TAIR IDAT3G58100.1
Annotated Gene Nameplasmodesmata callose-binding protein 5
Annotated Gene Symbol(s)PDCB5
Annotation TypeOrtholog
Chromosome Positionchr3:21515397-21516329 | Reverse length=180
E-Value4.9E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5461840308221
Replicate 210.316101360609
Replicate 38.606577709537
Condition 2: 8 Hour
Replicate 15.9445452473081
Replicate 23.7483559155745
Replicate 35.9805884703009
Condition 3: 24 Hour
Replicate 112.341480185991
Replicate 210.963885922484
Replicate 313.157926516979


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_315297.p1 GENE.R_Transcript_315297~~R_Transcript_315297.p1 ORF type:complete len:173 (+),score=37.14,X8|PF07983.9|1.7e-18,X8|PF07983.9|7.9e+03 R_Transcript_315297:230-748(+)
ATGGCAAACTCCTTTTTGTTCACTTTTATTACTACCCTTTTTACCCTCTTCATTGTATCCACCTCTGAAAACAGTGGTGCAGTGATTCAGCAACAGATGCTATGGTGTGTTGCCAAGAACAATGCTGAAGACTCAGCCCTGCAGCAGGCCTTGGACTGGGCTTGTGGGCCTGGTGGGGCTGATTGTGGACCGATTCAACAAGGTGGGCCTTGTTATGATACCAATGACTTGATTGGTATGGCTTCTTATGCTTTCAATGATTATTGTCTTAAGCATGGCATGACTGATGATACTTGCAACTTTAGTAACACTGCTGCTCTTACTGCTCTTGACCCTAGTCATGATAAGTGTAAATTTGCATCAAGCTCGTTCTCTACTGGGAATTCTTCCACCCCTTCGACTGCTGGAATTCTCCCAGGTAGTGAAGATATGAGTGGGAGTAGTCAGCTGGCTTCAATAGGGTTTTGGACACTAGCCCTCCCGAACCTGCTCGTCACAGTCTTCACATTTTTCCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_315297.p1 GENE.R_Transcript_315297~~R_Transcript_315297.p1 ORF type:complete len:173 (+),score=37.14,X8|PF07983.9|1.7e-18,X8|PF07983.9|7.9e+03 R_Transcript_315297:230-748(+)
MANSFLFTFITTLFTLFIVSTSENSGAVIQQQMLWCVAKNNAEDSALQQALDWACGPGGADCGPIQQGGPCYDTNDLIGMASYAFNDYCLKHGMTDDTCNFSNTAALTALDPSHDKCKFASSSFSTGNSSTPSTAGILPGSEDMSGSSQLASIGFWTLALPNLLVTVFTFFL*

Click here to download the sequence:
Link to NCBI Protein BLAST