Transcript Information: R_Transcript_315346.p1


Annotated TAIR IDAT5G17790.1
Annotated Gene Namezinc finger (Ran-binding) family protein
Annotated Gene Symbol(s)VAR3
Annotation TypeOrtholog
Chromosome Positionchr5:5869810-5872671 | Reverse length=758
E-Value1.3E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9372580846674
Replicate 20.24133678639423
Replicate 32.6329583443853
Condition 2: 8 Hour
Replicate 11.6886803411893
Replicate 21.5421297821507
Replicate 32.7123096329314
Condition 3: 24 Hour
Replicate 13.6943597837685
Replicate 22.0280697830416
Replicate 33.2705765624099


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_315346.p1 GENE.R_Transcript_315346~~R_Transcript_315346.p1 ORF type:internal len:87 (+),score=12.56,zf-RanBP|PF00641.14|9.4e-11,zf-RanBP|PF00641.14|8e-05 R_Transcript_315346:1-258(+)
GTTCCACCTGTAGAGAAACGTTTCCCTGAAGGAAATGGGCAAGCACCAAGTTCGTTTGGAAAAAATATTGTAATGAAGAGAGGCGACTGGATATGCTCAAGATGCAGTTTTATGAACTTTGCAAAGAACTCGAAATGTCTTCAGTGCGAGGGACCTCAGCCAAAGAGATACCTGACTGGTGGTGAATGGGACTGTCCCGAATGCAATTTTTGTAACTTCAGTAGAAAAGTGGTATGCCTGAGGTGCAACTGCAAGAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_315346.p1 GENE.R_Transcript_315346~~R_Transcript_315346.p1 ORF type:internal len:87 (+),score=12.56,zf-RanBP|PF00641.14|9.4e-11,zf-RanBP|PF00641.14|8e-05 R_Transcript_315346:1-258(+)
VPPVEKRFPEGNGQAPSSFGKNIVMKRGDWICSRCSFMNFAKNSKCLQCEGPQPKRYLTGGEWDCPECNFCNFSRKVVCLRCNCKK

Click here to download the sequence:
Link to NCBI Protein BLAST