Transcript Information: R_Transcript_31583.p1


Annotated TAIR IDAT2G20890.1
Annotated Gene Namephotosystem II reaction center PSB29 protein
Annotated Gene Symbol(s)PSB29, THF1
Annotation TypeOrtholog
Chromosome Positionchr2:8987783-8989185 | Forward length=300
E-Value6.2E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.072800802037
Replicate 229.893037880831
Replicate 336.184880406126
Condition 2: 8 Hour
Replicate 125.896914791663
Replicate 226.681459010499
Replicate 325.658378402378
Condition 3: 24 Hour
Replicate 133.541745475052
Replicate 233.568851667353
Replicate 331.310547043629


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31583.p1 GENE.R_Transcript_31583~~R_Transcript_31583.p1 ORF type:complete len:295 (+),score=67.96,ThylakoidFormat|PF11264.4|1.5e-75 R_Transcript_31583:354-1238(+)
ATGGCTGCTGTGACATCAGTGTCTTTTACGGCGTTATCTCAGTCATTTGAGAGAAAAGTGACCGTTTCTCCAACGCGAACTCTTTCATCCACTTTCGATTCAATTCGTCTCCGCTCGAATTTCTCCAATAATTGCTCTTCTATTGGTGTTAGAACTTCGGGTTCAAGTCGTCGTTTGGTTGTTCAGTGCATGTCCACTGACTCAGAAGTCGCCACTGTATCTGAGACAAAGTTAAGCTTCCTTAAGGCTTATAAGCGACCAATTCCCAGTATCTACAACAATGTACTGCAGGAGTTAATTGTGCAGCAACACCTGATGAGATACAAGAGGACATATAGATATGATCCTGTGTTTGCTCTTGGATTTGTTACTGTATATGATAAATTGATGGATGGATACCCGAGTGATGAAGATCGAGAGGCCATCTTTGAAGCTTATGTTAATGCATTAAAAGAGGATCCAGAGCAGTATAGGAAAGATGCACAGAAATTGGAGGAGTGGGCCCGTACCCAAACACCTGCTTCACTGGTGGAGTTCTCTTCAAGAGAAGGCGAGGTTGAGAGCATCCTTAAAGATATTTCTGCAAGAGCTGCAGATAATGGGACTTTTAGCTACAGTCGGTTCTTTGCAGTTGGTCTGTTTCGTCTTCTTGAATTGGCTAATGCAACTGAACCACCAACCTTGGAGAAGCTCTGCACAGCCTTAAATGTAAACAAGAAAAGTGTGGACCGGGATCTTGATGTGTACCGCAATCTGTTGTCAAAGTTAGTGCAAGCGAAAGAGTTGCTGAAGGAGTATGTGGATAGAGAGAAGAAGAAAAGAGGAGAGAGAACAGAAGTTCAGAAGGCTAATGAGGCAATCACAAAATGCTTGGGAGCATACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31583.p1 GENE.R_Transcript_31583~~R_Transcript_31583.p1 ORF type:complete len:295 (+),score=67.96,ThylakoidFormat|PF11264.4|1.5e-75 R_Transcript_31583:354-1238(+)
MAAVTSVSFTALSQSFERKVTVSPTRTLSSTFDSIRLRSNFSNNCSSIGVRTSGSSRRLVVQCMSTDSEVATVSETKLSFLKAYKRPIPSIYNNVLQELIVQQHLMRYKRTYRYDPVFALGFVTVYDKLMDGYPSDEDREAIFEAYVNALKEDPEQYRKDAQKLEEWARTQTPASLVEFSSREGEVESILKDISARAADNGTFSYSRFFAVGLFRLLELANATEPPTLEKLCTALNVNKKSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRGERTEVQKANEAITKCLGAY*

Click here to download the sequence:
Link to NCBI Protein BLAST