Transcript Information: R_Transcript_316048.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value5E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41216363446139
Replicate 20.27092000537159
Replicate 30.36946350961536
Condition 2: 8 Hour
Replicate 10
Replicate 20.36065938453525
Replicate 30.29276791323205
Condition 3: 24 Hour
Replicate 10.22217232801004
Replicate 20.28458398568487
Replicate 30.14121099797998


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_316048.p1 GENE.R_Transcript_316048~~R_Transcript_316048.p1 ORF type:complete len:310 (+),score=36.61,zf-RVT|PF13966.2|3.9e+03,zf-RVT|PF13966.2|9e+03,zf-RVT|PF13966.2|1.4e-16 R_Transcript_316048:525-1454(+)
ATGAAGGAGGAAGAGAAGAAGGTAATATTAAGCTACATGAATATGCCAGAAGGGAAATTGCCTGTAAGATATTTAAGGATCCCTCTGTCCCATAAAAAGCTATCCAATGTTCAATGCATGGTTCTGGTTGATAAAATTGTTGCAAGAATAACCTCATGGACCACTAAATTCTTATCATATGCGGGGAGAGTGCAATTAACTCAATCCGTGCTTTTTGGTATACAAGCATTTTGGGCTCAGATTTTCCTCATACCCAAAAAATTCATAAGAATGGTTGAAGCTATTTGTCGAAGCTTCATATGGACTAGTAAGGCCAGTGTCTCAAGGAAAGCTTTAATAGCTTGGGAAAAAGTCACCAACCCAAAGAAATGTGGAGGTTTGGGGCTAATGAACCTGATATACTGGAATCAAGCTGCAATTTATAAGCTTTGCTGGGAATTTACTATGAAGAAGGATAAAGCTTGCATTAAGTGGCTCCATGAATATTATCCTGGCATTGATAACAACAGACAAATCCCAAGAAACTTATCTTGGATGCTGAGGAAGGTTGTAGAACTCAGAGAGGATATGCACAGATTGCAAAGCCAGCAGCATAAGGAGATGTTGAAGATTAAAGATGTTTACAGTATGCTAATGGCAGAGGGACCTAAGGTCTCTTGGTACATTCTTGTATGGAATAGCTTTGCCAGACCAAGGGCCAAATTCTTTCTCTGGTTATTAATCAACCAAAAGCTGATGACTAGAGATAAAATCAGGAAATGCGATGGAAATTGCACCGCTACCTGTCTGTTGTGTAACAAGGAAGAGGAAAGTCGTGAGCATCTTCTAGTAAAGTGCTCTTACATTCAAGAGCTGGTTGAGAAGTGTCTGAGAGGAATAAAGATGAGATGGACCACAACCAATAGTTGGACACAAGCTTTGGAAAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_316048.p1 GENE.R_Transcript_316048~~R_Transcript_316048.p1 ORF type:complete len:310 (+),score=36.61,zf-RVT|PF13966.2|3.9e+03,zf-RVT|PF13966.2|9e+03,zf-RVT|PF13966.2|1.4e-16 R_Transcript_316048:525-1454(+)
MKEEEKKVILSYMNMPEGKLPVRYLRIPLSHKKLSNVQCMVLVDKIVARITSWTTKFLSYAGRVQLTQSVLFGIQAFWAQIFLIPKKFIRMVEAICRSFIWTSKASVSRKALIAWEKVTNPKKCGGLGLMNLIYWNQAAIYKLCWEFTMKKDKACIKWLHEYYPGIDNNRQIPRNLSWMLRKVVELREDMHRLQSQQHKEMLKIKDVYSMLMAEGPKVSWYILVWNSFARPRAKFFLWLLINQKLMTRDKIRKCDGNCTATCLLCNKEEESREHLLVKCSYIQELVEKCLRGIKMRWTTTNSWTQALER*

Click here to download the sequence:
Link to NCBI Protein BLAST