Transcript Information: R_Transcript_316505.p1


Annotated TAIR IDAT3G01670.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 121 Blast hits to 111 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:247288-250261 | Forward length=822
E-Value1E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4085886267307
Replicate 20.77639052986311
Replicate 31.2153092293779
Condition 2: 8 Hour
Replicate 10.70859416246047
Replicate 21.0065991825614
Replicate 31.2840367641431
Condition 3: 24 Hour
Replicate 11.3656573431271
Replicate 20.78008954275354
Replicate 31.37238019741


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_316505.p1 GENE.R_Transcript_316505~~R_Transcript_316505.p1 ORF type:complete len:622 (+),score=81.29,SEO_C|PF14577.2|7e-45,Jacalin|PF01419.13|0.094,Jacalin|PF01419.13|91,Jacalin|PF01419.13|3.8e-11 R_Transcript_316505:768-2633(+)
ATGGCACAAGGCTGTTCCAACCACCAAGACTTTTCATTTTCTTTACCACCAGGTTCTTCTGTTGCTGGATTTTGTGGAAGAGCTGGTCGTTTCTTCGATTCTATTGGAATTTACCTTCGAATGGAATTGGAAAAACATGGACCGTGGGGCAGTCCATATGCAGCAACTAATTGTGAGCTGAGGCTTGCTCCTCATGAAATAATTAGGAATGTGCACATTTGGCATGGAACTATCATCCAAAGAATTGATTTCGACATAGAGGATACTCATGCAAGAACGACTAGAACCACAGGATTGGGAAGCAGTGAGCCTCGGGAAACATTTGAGGATACTTCTATCCCACTGGCTCCAAATGAACGAATAACAAATATAAGCGGGGAATATGGAGTCCATTCAATCAGTGGTCAATGTCATGTCGCAGAAATTAGCATATACACAAATTTACATCCGGATGGTTATGGACCATTTGGGAAGGCAGAGACTTGTACTGACAGACATCAGTTTTCAAGCTCAGTACCTCCAGATTCTTCTATTGTTGGATTTTTTGGAAGATATGGTCAATTTATTGATTCAATCGGAGTTTACGTTCGAAAGGTCAAAGTCGAAGAGCTGAGGGATCGTGTTGTCCTTTTATTAGTTTCTGACCTCCAGGTTGGCATTGATCACCAACTTAGGGGCCTTAGCATATTCTGGGAAAAAGTATTGCTGGAAAAGGCCTCTTTAGAGGCATCAGATAATTTGCATGGACAGTTTAAGTATACCACAAAGGCGGTGATTGTATGGGTTCCCATTGTAGACAGAACAATTCCATGGACTAAAGAAAATGATCAACAATTTACGAATCTGGTATACAAAATGCCTTGGTTATCAGCTGTTCACCCTCTTACAATTTCTCCAGTAATCATCCAAGGTTACATAATGAAGGTTTGCAAGTTTAACAATAAAGATCCCTTGATTATTACCCTCAACGATAAAGGTAATATCGTAAATACCAATGCTCTTCACCTCATCAATCTTGTGCCATCGTCAAAGGCGTTTCCTTGTAGCGACCAAGAGGAACAAGCCTTTTGGAAGCGTTACAATGACATATATTACCTACTCTTTGACTCATTCCTGGTGGATCGTTACCTGGTAGGAGAATATATATGCCTATATGGAGGAAGCGAAGATTTGGGATGGATAAAAGACTTTACAACCACTCTAAAAAAAACTGCACAAGCAACTGAGTTGCCACTTCACATGTTATATGTTGGTAAAAGTGATTGCAAAGAAAAAATCAAGGAAATCAACAAGGAGATTGTTAATCAAAAACTTAGTGATGTTATGCCTGAAGATTTTAGCTATTTCTGGGAGAGAATAAAGAGCATGTGGTATTCCAAATGCAAGCTAATTAAAGTGGGGATTAATGATAATCCAGTAACAATTGAGCCTTTAATGAGAAACATAGGCAAGATTTTGAGCTTTGATGCAAGTAACAATGGATGGGCTGTGATTAGCTTCAAGCATGAGCTGGCTGTTGGTTTTGAGCACAATACAGTAGTTGTTCAAGCTAGGGGAGATAAGTTCCTAACATGCTTAAGGGAGATTAATATTGATGATGGTGGTGATCAATTGAAGAAAGAAATTGATAAGCAAGAGGGATTTTTACCTTTACTTGCTAACCATCTAAGGCAAGTGTCTCAATCTCAATCACGTTGTTATAACCATTTGATATTTCCAGGCAAGAAAAAAATACTTCTCAAGGACCAAGAGAATGTTGATTGTGACGAATGTGGTCGTCATAATTCCATGCAGAGTGTACGTATGTATCATTGTTGTAACAAGTCAAACCATACTCATGCCGAGCAAAAAGTCTTGCCTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_316505.p1 GENE.R_Transcript_316505~~R_Transcript_316505.p1 ORF type:complete len:622 (+),score=81.29,SEO_C|PF14577.2|7e-45,Jacalin|PF01419.13|0.094,Jacalin|PF01419.13|91,Jacalin|PF01419.13|3.8e-11 R_Transcript_316505:768-2633(+)
MAQGCSNHQDFSFSLPPGSSVAGFCGRAGRFFDSIGIYLRMELEKHGPWGSPYAATNCELRLAPHEIIRNVHIWHGTIIQRIDFDIEDTHARTTRTTGLGSSEPRETFEDTSIPLAPNERITNISGEYGVHSISGQCHVAEISIYTNLHPDGYGPFGKAETCTDRHQFSSSVPPDSSIVGFFGRYGQFIDSIGVYVRKVKVEELRDRVVLLLVSDLQVGIDHQLRGLSIFWEKVLLEKASLEASDNLHGQFKYTTKAVIVWVPIVDRTIPWTKENDQQFTNLVYKMPWLSAVHPLTISPVIIQGYIMKVCKFNNKDPLIITLNDKGNIVNTNALHLINLVPSSKAFPCSDQEEQAFWKRYNDIYYLLFDSFLVDRYLVGEYICLYGGSEDLGWIKDFTTTLKKTAQATELPLHMLYVGKSDCKEKIKEINKEIVNQKLSDVMPEDFSYFWERIKSMWYSKCKLIKVGINDNPVTIEPLMRNIGKILSFDASNNGWAVISFKHELAVGFEHNTVVVQARGDKFLTCLREINIDDGGDQLKKEIDKQEGFLPLLANHLRQVSQSQSRCYNHLIFPGKKKILLKDQENVDCDECGRHNSMQSVRMYHCCNKSNHTHAEQKVLPL*

Click here to download the sequence:
Link to NCBI Protein BLAST