Transcript Information: R_Transcript_316579.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value4E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21101688964993
Replicate 20.1213658983601
Replicate 30.19861333175855
Condition 2: 8 Hour
Replicate 10.14153679160257
Replicate 20.12925365226119
Replicate 30.36722911659742
Condition 3: 24 Hour
Replicate 10.26540817604282
Replicate 20.12748704561027
Replicate 30.18977778630258


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_316579.p1 GENE.R_Transcript_316579~~R_Transcript_316579.p1 ORF type:complete len:346 (+),score=50.28,zf-RVT|PF13966.2|3.2e-13,zf-RVT|PF13966.2|1e+04 R_Transcript_316579:491-1528(+)
ATGGACCACCAAATATTTATCATATGCTGGGCAGAATTCAGCTTACAATCAGTGATGTTTGGCATACAAGCCTACTGGGCTCAAGTTACAATTCTACCTAAGAGAATCTTGAAACTGGTAGAAGCTGTCTGCAGAAGTTTTATTTGGACAGGGAAGGCTAATGTGAGTAAGAAAGCTTTGGTGGCTTGGGATAAAATCACCATCCCTAAGAAGAGTGGAGGATTAGGCCTACTGAATCTAGCTTGCTGGAACAAAGCTGCAATCAACAAGCTGTGCTGGGATTTTGCAAAGAAGAAGGATAAAGCCTGGATTCAATGGCTCCATGGGTACTATCCAGGGCTTGGTAACAATAGACAGATTCCTAAGAATTTGTCCTGGATGCTCCGGAAGATTGTACAACAGAGACAAGAAATTCAGGGTGTTCCGGATTGTCCTAGTCAGGGGAAAATGAGAATTCATTATTTTTACTCAAAGATGATGGAGAATGGTCCTACTGTGAAGTGGTATCAGCTGGTGTGGATAAACTTTGCTCAACCCAGAGCAAAAATGATTCTATGGTTAAACATGCTACAGAAGTTAATGACCAAAGATCGAGTTTGTAAATGGGATCCTAGCTGTGATCCAACTTGTTTACTCTGTAAAAGTGAGCTAGAGTCTAATGATCATCTCATGATCAAGTGCACTTTCAGTCTAGCAGTTTTCACTAAACTTTTGAGGGAGATTCGTATACCTTGGACAGCAGTGAATGACAGGCATCAGATGATTGAAAGGTGGCTACACATCAGTAGAGGGAAGCAACCAGTAGCTAGATGTGCCAAAGCTATATTGGCTGAGGGCTGCTATGCTATATGGAGGGAGAGAAACCAAAGGCTCTTTCAACATAAAGAGAAGGATGTAGACCAAATTGCTAGAGAAGTGCAGTTTATGGTTTATACGAGGGGATATACTATGAAGAATGTAGGAGAATTCTACAAAGTCTATCCTAATGTGTGTGTAATGCTGCATAATGAAGGAAAGGCTCTTGGAAACCCTTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_316579.p1 GENE.R_Transcript_316579~~R_Transcript_316579.p1 ORF type:complete len:346 (+),score=50.28,zf-RVT|PF13966.2|3.2e-13,zf-RVT|PF13966.2|1e+04 R_Transcript_316579:491-1528(+)
MDHQIFIICWAEFSLQSVMFGIQAYWAQVTILPKRILKLVEAVCRSFIWTGKANVSKKALVAWDKITIPKKSGGLGLLNLACWNKAAINKLCWDFAKKKDKAWIQWLHGYYPGLGNNRQIPKNLSWMLRKIVQQRQEIQGVPDCPSQGKMRIHYFYSKMMENGPTVKWYQLVWINFAQPRAKMILWLNMLQKLMTKDRVCKWDPSCDPTCLLCKSELESNDHLMIKCTFSLAVFTKLLREIRIPWTAVNDRHQMIERWLHISRGKQPVARCAKAILAEGCYAIWRERNQRLFQHKEKDVDQIAREVQFMVYTRGYTMKNVGEFYKVYPNVCVMLHNEGKALGNPS*

Click here to download the sequence:
Link to NCBI Protein BLAST