Transcript Information: R_Transcript_316579.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18437334297696
Replicate 20.42416768517774
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.67760248003593
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.22278039283411
Replicate 30.22108792613028


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_316579.p2 GENE.R_Transcript_316579~~R_Transcript_316579.p2 ORF type:5prime_partial len:99 (+),score=6.88,RVT_1|PF00078.23|2.1e-07,RVT_1|PF00078.23|1.6e+02 R_Transcript_316579:1-297(+)
GTCTCGTTTACGGTTTTGGTGAACGGGGAGGCCTCGGAGAAGTTTTGGCCGCAAAGGGGTTTAAGACAAGGGGACCCTTTATCTCCTTATCTTTTTGTTATTGCCATGGAATATCTGAATCGATGCCTTAAGGAAATGTGTGTGAACCCAGACTTCAATTCCATCCAAAATGCCAGAAGATTAAACTCACCCATCTTGTATTTGCTGATGACCTTATGCTTTTTGCAAGGGGTGACCAAAGATCAGTTCAGCTGCTATATGAAGCATTTGAGAAATTTTCTAAAGCCTCTGGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_316579.p2 GENE.R_Transcript_316579~~R_Transcript_316579.p2 ORF type:5prime_partial len:99 (+),score=6.88,RVT_1|PF00078.23|2.1e-07,RVT_1|PF00078.23|1.6e+02 R_Transcript_316579:1-297(+)
VSFTVLVNGEASEKFWPQRGLRQGDPLSPYLFVIAMEYLNRCLKEMCVNPDFNSIQNARRLNSPILYLLMTLCFLQGVTKDQFSCYMKHLRNFLKPLV*

Click here to download the sequence:
Link to NCBI Protein BLAST