Transcript Information: R_Transcript_317280.p1


Annotated TAIR IDAT2G36660.1
Annotated Gene Namepoly(A) binding protein 7
Annotated Gene Symbol(s)PAB7
Annotation TypeOrtholog
Chromosome Positionchr2:15361476-15364398 | Reverse length=609
E-Value3.9E-199
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61329948807855
Replicate 20.16797040333038
Replicate 30.29320624123075
Condition 2: 8 Hour
Replicate 10.5093059909027
Replicate 20.17888705472948
Replicate 30.29042576992619
Condition 3: 24 Hour
Replicate 10.62445235659355
Replicate 20.28230731379939
Replicate 30.59534556748361


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_317280.p1 GENE.R_Transcript_317280~~R_Transcript_317280.p1 ORF type:complete len:625 (+),score=146.36,RRM_1|PF00076.18|4.9e-14,RRM_1|PF00076.18|7.8e-22,RRM_1|PF00076.18|8.6e-20,RRM_1|PF00076.18|4.2e-17,RRM_6|PF14259.2|4.5e-09,RRM_6|PF14259.2|1.2e-13,RRM_6|PF14259.2|3.5e-12,RRM_6|PF14259.2|8e-12,RRM_5|PF13893.2|1.2,RRM_5|PF13893.2|9.3e-10,RRM_5|PF13893.2|7e-07,RRM_5|PF13893.2|2.5e-06,PABP|PF00658.14|8.2e-30,RRM_occluded|PF16842.1|0.024,RRM_occluded|PF16842.1|2.9e+02,RRM_occluded|PF16842.1|0.13,Nup35_RRM_2|PF14605.2|2.6e+03,Nup35_RRM_2|PF14605.2|7.5e+02,Nup35_RRM_2|PF14605.2|0.18,Nup35_RRM_2|PF14605.2|0.037 R_Transcript_317280:163-2037(+)
ATGGAGGTGGCAACGACAGTGCCGGCAGCACAGGCGTCACTTTACGTTGGAGACTTGCACCCTGACGTCAGCGACGGGCAGCTATTGGACATCTTCACGGAATTCAAGTCTCTGACGTCAGTTCTTGTTTGTCGCGATTCTTCTACTGGCCGTTCCCTCTGTTATGGCTACCTCAATTTCCTCTCCCCCTCTGACGCAATTCAAGCTATTGAGGTGAAGAATCATACTGTGTTGAATGGAAAAGCAATAAGGGTGATGTGGTCACTTCGTGATCCTGATTCTAGAAGAAGCGGAGTTGGCAATGTGTTTGTTAAGAATCTTGGTGATTCCATTGATAGTGCAAAGCTGCAGGAGACTTTTGAGAAATTCGGGGATATATCTTCTTGTAAAGTTGTTACTTCTGAGGACGGAAAGAGCAAAGGGTACGGTTTTGTTCAATTTGTAACTGAGGAATCTGCAAATGCTGCTATCGAAAATTTGAATGGGACAAATCTTGAAGGCAAACAAATATATGTTGGTAAATTTGTCAAAAGAACAGAAAGGGCTTTACCTGGTGCTGATTTTAAATATACCAATCTGTACATGAAGAATGTGGATCCAGATATCACTGATGAAGTTCTGTGCGAGAAGTTTTCCGAATTTGGCAAAATTGTCAGCTTAGCAATTGCAAAGAATGAGAATGGGACCTCAAAAGGTTTTGGATTTGTTAACTTTGAGAACCCAGATGATGCAAAGAGAGCAATGGAAGCTATGGATGGGTTACTGCTTGGTTCTAAGACTCTTTATGTAGCAAGGGCACAAAAGAAGGCAGAGCGTGAACAGATTTTGCGACGCCAGTTTGAGGAGAAAATGAAGGAGCAGATGATGAACTATATGGGTTCAAACGTATATATTAAGAACATCAGTGATGTTGTAACTGAGGATGAGCTGCGGGAACTTTTCAGCCAGTGTGGCAATATAACTTCAGCCAAACTAATGCGTGATGACAAAGGAATAAGTAAGGGATTTGGGTTTGTGTGCTTCTCCAGTCCTGATGAGGCGAGCAAAGCTGTGCACATTTTTCATGGACATATGTTCTACAGGAAGCCCTTGTATGTCGCTATTGCTCAAAGGAAGGAAGACAGACAAGCTCAGTTGCAGCTCCAGTATGCACAGCGCTTGGCTGGACTTCCTGGACTATCAAGTGCAGTGATCCCAGGAGGATACCCCCATTTTTACTATACTTCTCCTGGTGTTGTATCGCAAGTACCACCCCGACAAGGCTTGATGTATCAAACTCTAGGAGTGAGGCCAGGGTGGCGGGGTAATGGCTTTGCACCTGTAAGCCGTCCTCCTTTTCAACCATCACCAGTTACTACACTCCCCAATAATGGAAGGCCAAAGAAGCAGAATCGGGCTAGAGTTAGTGGGCAAACACCTATGCAGAATGGAGTTCCAATTCAACCTTTTGCTTCACTCAAGGATTCAACCAATCAGCAGAGGGCTGGACAGGTTAAGTATGTGCCTAACACAAAGCGTGATGTGAACAAAACATCTGGAGTCCCATCAGCTGTTTCGAATAGAGTCAGCCCTGCTGAAGGACCAGACAATTTGAGTAGTATGCTTGCTGCAGCTGCCCCTCAGCAGCAGAAGCAGATACTTGGCGAGCGGCTTTATCCACTTGTCCACAGCCACAAGCCTGAACTTGCAGCAAAGATTACAGGCATGCTGTTGGAGATGGACAACACAGAGCTACTTCTGCTATTGGAGTCACCGGAATCATTAGCATCAAAGGTTGATGAAGCACTGCAGGTGCTCAAGCTTTCAAGAACCAAGATCTCAAATCAAGAGAATATTCATGCCAACTTCCTCAGTGCCGAGGTTGCTGTCAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_317280.p1 GENE.R_Transcript_317280~~R_Transcript_317280.p1 ORF type:complete len:625 (+),score=146.36,RRM_1|PF00076.18|4.9e-14,RRM_1|PF00076.18|7.8e-22,RRM_1|PF00076.18|8.6e-20,RRM_1|PF00076.18|4.2e-17,RRM_6|PF14259.2|4.5e-09,RRM_6|PF14259.2|1.2e-13,RRM_6|PF14259.2|3.5e-12,RRM_6|PF14259.2|8e-12,RRM_5|PF13893.2|1.2,RRM_5|PF13893.2|9.3e-10,RRM_5|PF13893.2|7e-07,RRM_5|PF13893.2|2.5e-06,PABP|PF00658.14|8.2e-30,RRM_occluded|PF16842.1|0.024,RRM_occluded|PF16842.1|2.9e+02,RRM_occluded|PF16842.1|0.13,Nup35_RRM_2|PF14605.2|2.6e+03,Nup35_RRM_2|PF14605.2|7.5e+02,Nup35_RRM_2|PF14605.2|0.18,Nup35_RRM_2|PF14605.2|0.037 R_Transcript_317280:163-2037(+)
MEVATTVPAAQASLYVGDLHPDVSDGQLLDIFTEFKSLTSVLVCRDSSTGRSLCYGYLNFLSPSDAIQAIEVKNHTVLNGKAIRVMWSLRDPDSRRSGVGNVFVKNLGDSIDSAKLQETFEKFGDISSCKVVTSEDGKSKGYGFVQFVTEESANAAIENLNGTNLEGKQIYVGKFVKRTERALPGADFKYTNLYMKNVDPDITDEVLCEKFSEFGKIVSLAIAKNENGTSKGFGFVNFENPDDAKRAMEAMDGLLLGSKTLYVARAQKKAEREQILRRQFEEKMKEQMMNYMGSNVYIKNISDVVTEDELRELFSQCGNITSAKLMRDDKGISKGFGFVCFSSPDEASKAVHIFHGHMFYRKPLYVAIAQRKEDRQAQLQLQYAQRLAGLPGLSSAVIPGGYPHFYYTSPGVVSQVPPRQGLMYQTLGVRPGWRGNGFAPVSRPPFQPSPVTTLPNNGRPKKQNRARVSGQTPMQNGVPIQPFASLKDSTNQQRAGQVKYVPNTKRDVNKTSGVPSAVSNRVSPAEGPDNLSSMLAAAAPQQQKQILGERLYPLVHSHKPELAAKITGMLLEMDNTELLLLLESPESLASKVDEALQVLKLSRTKISNQENIHANFLSAEVAVN*

Click here to download the sequence:
Link to NCBI Protein BLAST