Transcript Information: R_Transcript_317684.p1


Annotated TAIR IDAT2G27900.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11877654-11885238 | Forward length=1124
E-Value1.9E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.71583554987976
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.28361891594355
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.17099769286638


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_317684.p1 GENE.R_Transcript_317684~~R_Transcript_317684.p1 ORF type:internal len:128 (+),score=32.99,DUF2450|PF10475.5|2.8e-27 R_Transcript_317684:1-381(+)
CTTCCAGTTTTAACAGAACTACGTCATGCATTGAACATGCAGAAAGAGCTTGAATCACTTGTTGAGGAAGGGAACTTCTGTAAGGCATTTCAAGTGTTCTCTGAATACTTGCAGCTTCTAGATACTCTTTCAGAGCTTTCATCTGCGCAGGAAATGAGCCGCAGTGTTGAGGTTTGGCTGGAGAACACCCTTCAGAAGCTGGATTCCTTATTGTTACAAGTTTGCCAGGTAGTTGATGCGTATGCATTAATCGGGGATGTTTCTGGTCTTGTGGAAAAGATACAGAGCTTTTTTATGCAAGAAGTTCTTTCAGAGACCCATTCTGCACTGAAGACTGCATTGGAAGAGGATCAGGATTCACAGACTTTGCAAATTAGTTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_317684.p1 GENE.R_Transcript_317684~~R_Transcript_317684.p1 ORF type:internal len:128 (+),score=32.99,DUF2450|PF10475.5|2.8e-27 R_Transcript_317684:1-381(+)
LPVLTELRHALNMQKELESLVEEGNFCKAFQVFSEYLQLLDTLSELSSAQEMSRSVEVWLENTLQKLDSLLLQVCQVVDAYALIGDVSGLVEKIQSFFMQEVLSETHSALKTALEEDQDSQTLQISS

Click here to download the sequence:
Link to NCBI Protein BLAST