Transcript Information: R_Transcript_317685.p1


Annotated TAIR IDAT2G27900.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11877654-11885238 | Forward length=1124
E-Value1.2E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39969987492085
Replicate 20.45977300181675
Replicate 30
Condition 2: 8 Hour
Replicate 10.17872894122077
Replicate 20.32643623125818
Replicate 30.52997403271203
Condition 3: 24 Hour
Replicate 10.33515047047743
Replicate 20.1609872911721
Replicate 30.47929280336272


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_317685.p1 GENE.R_Transcript_317685~~R_Transcript_317685.p1 ORF type:internal len:137 (+),score=35.69,DUF2450|PF10475.5|1.9e-36 R_Transcript_317685:1-408(+)
CTTCCAGTTTTAACAGAACTACGTCATGCATTGAACATGCAGAAAGAGCTTGAATCACTTGTTGAGGAAGGGAACTTCTGTAAGGCATTTCAAGTGTTCTCTGAATACTTGCAGCTTCTAGATACTCTTTCAGAGCTTTCATCTGCGCAGGAAATGAGCCGCAGTGTTGAGGTTTGGCTGGAGAACACCCTTCAGAAGCTGGATTCCTTATTGTTACAAGTTTGCCAGGTTTTCAAAGAGGAAAAATATGTAACTGTAGTTGATGCGTATGCATTAATCGGGGATGTTTCTGGTCTTGTGGAAAAGATACAGAGCTTTTTTATGCAAGAAGTTCTTTCAGAGACCCATTCTGCACTGAAGACTGCATTGGAAGAGGATCAGGATTCACAGACTTTGCAAATTAGTTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_317685.p1 GENE.R_Transcript_317685~~R_Transcript_317685.p1 ORF type:internal len:137 (+),score=35.69,DUF2450|PF10475.5|1.9e-36 R_Transcript_317685:1-408(+)
LPVLTELRHALNMQKELESLVEEGNFCKAFQVFSEYLQLLDTLSELSSAQEMSRSVEVWLENTLQKLDSLLLQVCQVFKEEKYVTVVDAYALIGDVSGLVEKIQSFFMQEVLSETHSALKTALEEDQDSQTLQISS

Click here to download the sequence:
Link to NCBI Protein BLAST