Transcript Information: R_Transcript_317746.p1


Annotated TAIR IDAT2G42360.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17640907-17641617 | Forward length=236
E-Value3E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2445200650945
Replicate 20.47718864582496
Replicate 31.0412153452797
Condition 2: 8 Hour
Replicate 10.74199590749228
Replicate 22.1175077501123
Replicate 31.5126342183656
Condition 3: 24 Hour
Replicate 12.1740347753508
Replicate 21.4202250043175
Replicate 31.4094355290805


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_317746.p1 GENE.R_Transcript_317746~~R_Transcript_317746.p1 ORF type:complete len:264 (-),score=34.31,zf-RING_2|PF13639.2|3e-13,zf-RING_11|PF17123.1|1.4e-09,zf-RING_11|PF17123.1|2.8e+03,zf-rbx1|PF12678.3|5.8e-09,zf-C3HC4|PF00097.21|1.3e-06,zf-C3HC4_2|PF13923.2|7.3e-06,zf-RING_5|PF14634.2|1.4e-05 R_Transcript_317746:978-1769(-)
ATGTCAAACCTTCTCAGCACTCCTCCTGCACCCACCATGGATTTCGACAACAATCAAAATTTCCACCACCAAAACCCAATCTACCACAGGAACAACAACACTTACGACCTCAACAGCAGAATCATGCTCACAGCTGTCCTTTCTCTCGGCTTCGTCATCGTCCTCGTCATTATCCTCCACATTTACGCCAGGTGTGTCCTCCGCTCCCCTCGCGGCCGCCTCGCCACCCTCAGCCACCACCATCCACCTCCTTCCGAGGCGCCCAAATCAGGGCTTGACCCGATTGTCATCCAAGCTCTGCCTTCCTTCTTGTACAAGCAATCCAACGGCCAGCAGGAGGATCAGATTGAGTGTTCTGTTTGCTTGAGCTATTTAGAGGAGGGGGAGCTGGCGAGGAAGTTGCCTAATTGTAGCCATGTTTTTCACATGGCTTGCATTGATATGTGGCTCAGTGGCCAGTCCACGTGTCCTGTTTGTAGGTCTGAGGCGGCCCCACGGATGGCCCCACACGAGCGTGAACCGTCAACGAGAAGCCAGCGGCTGGAAGAGGTGGTTCCGGTGGTGGTTGGTTCGGAGAGTCATGACCAAAATGAGATTGAGCATGATTTAGTACAAAGTAATTGTAATGAAACTAGTAATAAAGCAAACAGTAGTACTGGGATTGCACCAACAACAACATCAAGCTTTAGATTGAGCTCTTTTAGAAGGATGCTTGGTAGAGATAGATCATCTTCTTCAAGGAGAATTCAAGTTTGTAGTGAGTTAGATCTTGAGAGACAGGGTAACCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_317746.p1 GENE.R_Transcript_317746~~R_Transcript_317746.p1 ORF type:complete len:264 (-),score=34.31,zf-RING_2|PF13639.2|3e-13,zf-RING_11|PF17123.1|1.4e-09,zf-RING_11|PF17123.1|2.8e+03,zf-rbx1|PF12678.3|5.8e-09,zf-C3HC4|PF00097.21|1.3e-06,zf-C3HC4_2|PF13923.2|7.3e-06,zf-RING_5|PF14634.2|1.4e-05 R_Transcript_317746:978-1769(-)
MSNLLSTPPAPTMDFDNNQNFHHQNPIYHRNNNTYDLNSRIMLTAVLSLGFVIVLVIILHIYARCVLRSPRGRLATLSHHHPPPSEAPKSGLDPIVIQALPSFLYKQSNGQQEDQIECSVCLSYLEEGELARKLPNCSHVFHMACIDMWLSGQSTCPVCRSEAAPRMAPHEREPSTRSQRLEEVVPVVVGSESHDQNEIEHDLVQSNCNETSNKANSSTGIAPTTTSSFRLSSFRRMLGRDRSSSSRRIQVCSELDLERQGNH*

Click here to download the sequence:
Link to NCBI Protein BLAST