Transcript Information: R_Transcript_317747.p1


Annotated TAIR IDAT2G42360.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:17640907-17641617 | Forward length=236
E-Value3E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62941244671444
Replicate 20.18100258979567
Replicate 30.29620781374335
Condition 2: 8 Hour
Replicate 10.633255127946
Replicate 20.67468177969094
Replicate 30.39119850474972
Condition 3: 24 Hour
Replicate 10.49478032818328
Replicate 20.47532885540037
Replicate 30.094343554684902


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_317747.p1 GENE.R_Transcript_317747~~R_Transcript_317747.p1 ORF type:complete len:232 (-),score=31.92,zf-RING_2|PF13639.2|2.4e-13,zf-RING_11|PF17123.1|1.2e-09,zf-RING_11|PF17123.1|2.4e+03,zf-rbx1|PF12678.3|4.8e-09,zf-rbx1|PF12678.3|6.8e+03,zf-C3HC4|PF00097.21|1e-06,zf-C3HC4_2|PF13923.2|6e-06,zf-RING_5|PF14634.2|1.2e-05 R_Transcript_317747:978-1673(-)
ATGCTCACAGCTGTCCTTTCTCTCGGCTTCGTCATCGTCCTAGTCATCATCCTCCACATATACGCTAGGTGTGTCCTCCGCTCACCTCACGGCCGCCTCGCCACCGCCCTCTCCACCCTCAGCCACCGCCATACGCCTCCTTCCGAGGCGCCCAAATCCGGGCTTGACCCGATTGTCATCCAAGCTCTGCCTTCCTTCTTGTACAAGCAATCCAACGGCCAGCAGGAGGATCAGATTGAGTGTTCTGTTTGCTTGAGCTATTTAGAGGAGGGGGAGCTGGCGAGGAAGTTGCCTAATTGTAGCCATGTTTTTCACATGGCTTGCATTGATATGTGGCTCAGTGGCCAGTCCACGTGTCCTGTTTGTAGGTCTGAGGCGGCCCCACGGATGGCCCCACACGAGCGTGAACCGCCAATGAGAAGCCAGCAGCTGGAGGTGGTGGTTCCGGTGGTGGTTGGTTCGGAGAGTCATGACCAAAATGAGATTGAGCATGATTTAGTACAAAGTAATTGTAATGAAACTAGTAATAAAGCAAATACTAGTAATGAGAATGCAGCAACATCATCATCAACAACAACAACATCAAGCTTTAGATTGAGCTCTTTTAGAAGGATGCTTGGTAGAGATAGATCATCTTCTTCAAGGAGAATTCAAGTTTGTAGTGAGTTAGATCTTGAGAGACAGGGTAACCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_317747.p1 GENE.R_Transcript_317747~~R_Transcript_317747.p1 ORF type:complete len:232 (-),score=31.92,zf-RING_2|PF13639.2|2.4e-13,zf-RING_11|PF17123.1|1.2e-09,zf-RING_11|PF17123.1|2.4e+03,zf-rbx1|PF12678.3|4.8e-09,zf-rbx1|PF12678.3|6.8e+03,zf-C3HC4|PF00097.21|1e-06,zf-C3HC4_2|PF13923.2|6e-06,zf-RING_5|PF14634.2|1.2e-05 R_Transcript_317747:978-1673(-)
MLTAVLSLGFVIVLVIILHIYARCVLRSPHGRLATALSTLSHRHTPPSEAPKSGLDPIVIQALPSFLYKQSNGQQEDQIECSVCLSYLEEGELARKLPNCSHVFHMACIDMWLSGQSTCPVCRSEAAPRMAPHEREPPMRSQQLEVVVPVVVGSESHDQNEIEHDLVQSNCNETSNKANTSNENAATSSSTTTTSSFRLSSFRRMLGRDRSSSSRRIQVCSELDLERQGNH*

Click here to download the sequence:
Link to NCBI Protein BLAST