Transcript Information: R_Transcript_317757.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value7E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12088053612397
Replicate 20.1390483471278
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.14808531020653
Replicate 30
Condition 3: 24 Hour
Replicate 10.15203845846162
Replicate 20
Replicate 30.14495168666819


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_317757.p1 GENE.R_Transcript_317757~~R_Transcript_317757.p1 ORF type:5prime_partial len:151 (-),score=22.84,RVT_1|PF00078.23|8.9e-10 R_Transcript_317757:633-1085(-)
GCTAAGGGGTTTGGGGCGCGTTGGCGTGAGGGGGTGCGGGGGTGCTTTGGTAATGCTAGTTTTTCTGTTTTGGTGGATGGGGTCCCTAGTGATTGGTTTTCTTCTTCTCGGGGTTTGCGTCAAAGCGATCCTTTGACTCCCTTTCTTTTTACTTTGGTGGTGGACGCCTTGAGTCGGATGCTTGAGAGAGGGATGGAGAAAGGGGAAGGGGAGGGTTTTAGGGTGGGTCGAGAGGGGGTCCCGGTTTCTCATCTCCATTTTGTTGATGATACGATTCTTTTCCTCTCAGCTAACCATGATGTTACTTTTTTAGAGGTCTTTGAGCTTGTTTCAGGGATGACAGTTAACCTGTCTAAGTGTAGCCTCGCTGGTCTTAATGTAGATGCGGCTTTTTGGAGTCTCTTGCAAGGGATGTGGGTTGTCAAGTCGAGTAGTGGCCTCTTACTTATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_317757.p1 GENE.R_Transcript_317757~~R_Transcript_317757.p1 ORF type:5prime_partial len:151 (-),score=22.84,RVT_1|PF00078.23|8.9e-10 R_Transcript_317757:633-1085(-)
AKGFGARWREGVRGCFGNASFSVLVDGVPSDWFSSSRGLRQSDPLTPFLFTLVVDALSRMLERGMEKGEGEGFRVGREGVPVSHLHFVDDTILFLSANHDVTFLEVFELVSGMTVNLSKCSLAGLNVDAAFWSLLQGMWVVKSSSGLLLI*

Click here to download the sequence:
Link to NCBI Protein BLAST