Transcript Information: R_Transcript_317887.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7779156978966
Replicate 22.7189453776501
Replicate 34.7791035272548
Condition 2: 8 Hour
Replicate 13.1708314320174
Replicate 21.7695661888708
Replicate 35.3540721973803
Condition 3: 24 Hour
Replicate 13.1381175347221
Replicate 21.1106964908924
Replicate 33.3067755282363


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_317887.p1 GENE.R_Transcript_317887~~R_Transcript_317887.p1 ORF type:complete len:139 (+),score=14.69,zf-RVT|PF13966.2|4.8e-07,zf-RVT|PF13966.2|3.7e+03 R_Transcript_317887:236-652(+)
ATGAAAATGCGTATGGGTATTTGGAGCCTTGTTCATGAAATTCTTCCTACTGCTTCCTTCCTTAGTGTTAGGATTCCTAATCTTAGTCCTAAGTGTGTCTCTTGCTCTGCTCCCTTGGAAGATCTCCTCCATCTCTTCAGAGATTGTCCTTTAGCGTCTTTGGTTTGGTCTCTTATTTTTCAAGGTGTTGCCTCCCTTGACTTCCACAAGTTTTTCAATTATGGATGGATCGACTGGCTTTCTTTTAATCTGAGATTTGACATAGACTGGTGTTCTAAATTCGCCATTATTTTATGGCATATCTTGTGTGCCAGGAACAAGCAGATATTTCAGTATGTTATTATTGATCCATGTTGGGTTTTCTCTTGCATTTGCCATGATCTTTGTCTTGCTTTTTCTTCTGAACAGATTGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_317887.p1 GENE.R_Transcript_317887~~R_Transcript_317887.p1 ORF type:complete len:139 (+),score=14.69,zf-RVT|PF13966.2|4.8e-07,zf-RVT|PF13966.2|3.7e+03 R_Transcript_317887:236-652(+)
MKMRMGIWSLVHEILPTASFLSVRIPNLSPKCVSCSAPLEDLLHLFRDCPLASLVWSLIFQGVASLDFHKFFNYGWIDWLSFNLRFDIDWCSKFAIILWHILCARNKQIFQYVIIDPCWVFSCICHDLCLAFSSEQIG*

Click here to download the sequence:
Link to NCBI Protein BLAST