Transcript Information: R_Transcript_317924.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value4E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70844825623338
Replicate 20.33555731258924
Replicate 30.52298487662449
Condition 2: 8 Hour
Replicate 10.22361520499767
Replicate 20.10210448329308
Replicate 30.082884066759758
Condition 3: 24 Hour
Replicate 10.26207542497379
Replicate 21.0070894470583
Replicate 30.69960699912457


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_317924.p1 GENE.R_Transcript_317924~~R_Transcript_317924.p1 ORF type:3prime_partial len:438 (-),score=65.20,zf-RVT|PF13966.2|5.2e+03,zf-RVT|PF13966.2|3e-17,RVT_3|PF13456.2|1e-06 R_Transcript_317924:3-1313(-)
ATGGGTTTAAGAGACTTAAAAGCCTTCAATTGGGCCCTCTTAGGAAAGCAAGCTTGGAGATTTGCAAGAGGGGAAGGTGGACTCTTAGAGCAGATGTTTAAAGCCAAATATTACCCCCATTCAAGCTTTATGGAAGCTAATCTGGGCTCGAATCCTAGTTACACTTGGCGTGGCATATGGGAAGCGAGATGGGTTGTCCGCAAAGGCATGAAGTGGAGGATCGGGGATGGTGCTAATGTAAGGATATGGGGTGATCCCTGGTTGGAGTGTAGGAAAGATGGCAAGGTGATCTCACCAAGAGGTACTAACAACCCTGATATTCGAGTTGCCGAGCTTATTGATTCGAATACAAAAGAGTGGAAGGTTGAGTCCCTAAAATCTATTTTCCTGCCCCGTGAAGTAGATGACATCAGAGCAATTCCCCTAAGTAAGCGCACAGTCCATGACTCTATTTTTTGGAGTTGGGAGAAGAACGGCCTTTACTCGGTGAAAAGTGCTTACCATGGTATTATGGAGTCCTCTGCCCCTGGTGATATAGCTAGTGCCTCAACTGATGGCTCAAAGCTTTGGAAGAAAATCTGGAGCTTGAATCTATTGCCACGAATCAAAATGTTTATGTGGAGAGTTTGCATTGGTGCTCTACCTACCAAAGTGGGACTTCATAAGAGAATTGAGGCGATTAACACAGAATGTAGTGTTTGTGGAGCCGAGAAGGAGGATGCAATTCATGCGTTGTGGAGCTGTCCAAAGGCTCGTGCAGTGTGGGACGTGGTGGCCTTATCGGATGTACCTGAACCTCGATCGCATGATGTTTGTGACTGGTTACTCTGGCTTGGGCAGCACCTGAATTCTCTTGAATTCCACTGGTTCTGCACGTTACTGTGGGCAATCTGGGGGGCTCGAAATAGGCTTATTTTCCAAGGTGAGCATGACCTGCCTATTGATACTATAGAGTATGCTAAGAAGGCTGGCTATCGGGGAGAACAGGAGGGCCAGAAGACAAATGATGTTGCCCCCTTGCGCCTACCTTCCAAGTGGATTGCGCCTACTTTGGGTATGCTAAAATTAAATGTAGATGCTGGGAGGATTGAGGACAAATTGACAGGTATTGGCATTATTTGCAGAAATCACGAAGGTATACCTGCCTTTGGTGCTACGCACTTTGTTGAGGATTTGTGGTGTATGGACGTGGCTGAGCTAAAGGCAATTCTCATGGGGCTTCAATTGGCTTACACGTATGGGGTTGACAATTTGGTGGTGGAAACCGATTGTTTGGGAGCTTTCAATGCTCTCTCAAAAGGGCAGAAGGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_317924.p1 GENE.R_Transcript_317924~~R_Transcript_317924.p1 ORF type:3prime_partial len:438 (-),score=65.20,zf-RVT|PF13966.2|5.2e+03,zf-RVT|PF13966.2|3e-17,RVT_3|PF13456.2|1e-06 R_Transcript_317924:3-1313(-)
MGLRDLKAFNWALLGKQAWRFARGEGGLLEQMFKAKYYPHSSFMEANLGSNPSYTWRGIWEARWVVRKGMKWRIGDGANVRIWGDPWLECRKDGKVISPRGTNNPDIRVAELIDSNTKEWKVESLKSIFLPREVDDIRAIPLSKRTVHDSIFWSWEKNGLYSVKSAYHGIMESSAPGDIASASTDGSKLWKKIWSLNLLPRIKMFMWRVCIGALPTKVGLHKRIEAINTECSVCGAEKEDAIHALWSCPKARAVWDVVALSDVPEPRSHDVCDWLLWLGQHLNSLEFHWFCTLLWAIWGARNRLIFQGEHDLPIDTIEYAKKAGYRGEQEGQKTNDVAPLRLPSKWIAPTLGMLKLNVDAGRIEDKLTGIGIICRNHEGIPAFGATHFVEDLWCMDVAELKAILMGLQLAYTYGVDNLVVETDCLGAFNALSKGQKG

Click here to download the sequence:
Link to NCBI Protein BLAST