Transcript Information: R_Transcript_318.p1


Annotated TAIR IDAT5G13390.1
Annotated Gene Nameno exine formation 1
Annotated Gene Symbol(s)NEF1
Annotation TypeOrtholog
Chromosome Positionchr5:4292809-4296572 | Forward length=1123
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.285883144311
Replicate 213.501870239376
Replicate 318.234541825832
Condition 2: 8 Hour
Replicate 112.878778824944
Replicate 212.288983221501
Replicate 317.825944329747
Condition 3: 24 Hour
Replicate 119.771029453887
Replicate 216.827808483084
Replicate 322.01171434518


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_318.p1 GENE.R_Transcript_318~~R_Transcript_318.p1 ORF type:complete len:1059 (+),score=174.79 R_Transcript_318:250-3426(+)
ATGGCGATGGCAAAAAGTCCCCTGATCGCTGTGGCCCTTGTACCTTGCGCTGCCTTCCTCGTTGATCTTGGAGGTACTCCTGTTGTTGCCACCTTAATCCTGGGTCTCATGTGCTCTTACATTCTTGATTCTTTAAATTTCAAACCTGGAGCTTTCTTCGGAGTGTGGTTTTCCCTAATTGCTGCTCAGATCGCTTTCTTCTTCAGTTCTTCCCTTGTTTCCGCTTTTAATTCCATCCCTCTTGCTGTCCTTGCTGCTTTCCTTTGTGCTGAGACCAATTTTCTCATTGGTGTATGGTCTTCCCTTCAGTTCAAATGGATTCAGTTGGAAAACCCTTCCATTGTTGTTGCCCTGGAACGTCTTCTCTTTGCCTCCGTTCCTCTTGTGGCCCCTTCCCTCTTCACTTGGGCTGTTGTATCTGCTTTGGGTATGTCCAATGCTTCTTACTATCTAATGGTCTTCAATAGTGTCTTCTATTGGCTTTACTCCCTTCCCCGTACTTCCTCCTTCAAGTCCATGTCCATGTCTAAGCGTGGCGGTCAAGTTGCAGATGATATGCTTATTCTGGGTCCTCTAGAGAGTTGTTTCCATGCTCTCAACCTACTCTTCTTTCCCTTGTTATTCCACATTGCCTCTCACTATTCCCTCCTCTTTTCTTCCGCTTCTTCCGTCTGTGATCTCTTTCTTCTTTTCTTTATTCCCTTCCTCTTTCTTCTCTATGCTTCTACCAGGAATTCCCTCTGGTGGGTCACTAAGGATGCTACCCAGTTGCACAGTATCCGCATTGTCAATGGTGCTCTTGCCTTACTTGTTGTTGTCATCTGCTTGGAAGTCCGAATCGTTTTCCATTCCTTTGGCCGTTATATTCAGGTTCCCCCTCCTTATAGTTACTTCCTAGTCACTGCTACCATGCTTGGAGGTGCCGCTGCTGCTGCTGCTTCTGCTTTGGGTATCATTGCTGATGCTGTTACCTCCCTCGTTTTTGTCATCTTGGCTGTAGTAGCTAGTGCCGCTGGTGCTATTGTTGTGGGATTGCCCATTTGGCTGCTTCCACTACCCTCTTTGTCCGGGTTTTATCTGGCTCGCTTTTTCATAAAGAAGTCTTTGCCATCATATTTTGTATTTGTTGTGCTTGGGAGCCTAATGGTTATGTGGTTTGTGATACATAATTTCTGGGATCTCAACATATGGCTGGCAGGCATGTCTCTTAAATCATTTTGTAAGCTCATTGTTGCAGGCGTTGTTCTGTCCATGGCTACTCCTGGGTTGGCACTTCTCCCAACCAAGTTTAAATTCTTGACCGAAGTTGCATTAATCAGTCATGCACTGTTGCTGTGCCACATTGAGAATCGATTTTTCAATTACAGCAGCATATATTATTATGGTCTGGAGGATGATGTGATGTACCCCAGCTACATGGTTATAGTGACAACCTTTCTGGGGTTGACCCTTGTGAGGAGGCTTACTGTAGACAATAGAATTGGGTCAAGGGCAGTCTGGATTTTGACTTGCCTGTATACTTCTAAGCTAGCTATGCTATTTATTACGTCGAAAGCTGTAGTCTGGGTATCAGCTGTTCTATTATTGGCAGTTTCTCCACCTCTGCTTCTGTACAAGGAGAAGTCGAAAACTTCCTCCAAGATGAAGCCATGGCAAGGATATGTGCATGTCATTGTGGTTTCTGTGGCCGTCTGGTTTTGTCGTGAAGCTATTTTTGAGTCTCTTCAATTGTGGCATGGAAAACCTCCATCTGATGGCCTGCTTTTGGGTTTTTGCATCATTTTGATAGGATTGGCTTGTATTCCCATAGTTGCGTTCCACTTCTCTCATGTTCTGTTTGCCAGGAGGTGTTTGGTACTGGTAGTGGCGACTGGGTTGCTATTTATCTTGCTGCAACCACCCATGCCATTATCATGGACATACAACTTTGATGTCATCAAAGCTGCTCATCAGACTGGAGACGACATCTCAATCTATGGATTCATCACATCAAAGCCTACGTGGCCATCCTGGCTCCTCATTTTGGCTATCTTGCTCACCCTTGCTGCTGTTACCTCATTCATCCCTATCAAGTACATTGTTGAGTTAAGAACATTTTATTCCATTGCTGTTGGTATTGCGGTGGGTATCTACATATCTTTTGAGTACTTCCCTCAGTCTTGGATCTTGCAGGCTCTTATTGTTCTAACTATGATGTGCACTTCTGTTTTTGTCGTCTTCACACATTTTCCCTCTGCCTTAAGTACAAAGGCTTTGCCATGGGTTTTTGCTCTCCTTGTTGCTCTTTTTCCTGTTACCTACTTATTAGAGGGCCAGGTCAGAATAAATAGTCTAATGGAGGATGGAGATGTCACAGATGAGCAACAAAAGTTAACTGCTTTGTTGGCTGTTGAGGGAGCAAGGACATCTCTTCTTGGTCTGTATGCTGCTATTTTCATGCTTATTGGATTGGAAATGAAATTTGAGCTGGCTTCTTTAATGTGGGAAAAGGCTCATGAAAAGGGTAGTCTTAAACAGACACAGTCTGGTCACATCAGTTCTGTGAATTTCCCTGCCAAGATGAGATTTTTACAGCAGCGCAGAGTTTCTTCTGTTCCAACTTTTACAATGAAGAGGATCGCTGCTGAGGGGGCCTGGATGCCTGCAGTTGGAAATGTTGCTACTGTTATGTGCTTTGCCATATGCTTGATCCTGAATGTTAATCTCACTGGTGGCTCAAATCGTGCTATTTTCCTATTGGCTCCAATCTTACTGCTGCTCAACCAGGATTCTGATTTTGTTTCTGGTTTTGGAGATAAACAAAGATACTTCCCTGTTACTGTTGTTATTTCATCTTATCTAGTATTGACTGCTCTACATAGAGTTTGGGAAGAAGTGTGGCATGGAAATGCGGGTTGGGGCTTGGAGATTGGTGGACCAGACTGGTTTTTTGCCGTAAAAAATGTGGCTCTATTGATTCTTACATTTCCAAGCCATATTCTGTTCAATCAGTTTGTCTGGAGCTACACAAAGCAGAAAGACACAGCACCGCTGCTCACTCTACCTCTCAATCTGCCAACCATCATCATTACTGATGTGATCAAGGTCAAAATCTTAGGCCTGTTGGGAGTCATTTATTCCTTGGCCCAGTATCTGATATCAAGACAGCAATACATATCAGGATTGAAATACATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_318.p1 GENE.R_Transcript_318~~R_Transcript_318.p1 ORF type:complete len:1059 (+),score=174.79 R_Transcript_318:250-3426(+)
MAMAKSPLIAVALVPCAAFLVDLGGTPVVATLILGLMCSYILDSLNFKPGAFFGVWFSLIAAQIAFFFSSSLVSAFNSIPLAVLAAFLCAETNFLIGVWSSLQFKWIQLENPSIVVALERLLFASVPLVAPSLFTWAVVSALGMSNASYYLMVFNSVFYWLYSLPRTSSFKSMSMSKRGGQVADDMLILGPLESCFHALNLLFFPLLFHIASHYSLLFSSASSVCDLFLLFFIPFLFLLYASTRNSLWWVTKDATQLHSIRIVNGALALLVVVICLEVRIVFHSFGRYIQVPPPYSYFLVTATMLGGAAAAAASALGIIADAVTSLVFVILAVVASAAGAIVVGLPIWLLPLPSLSGFYLARFFIKKSLPSYFVFVVLGSLMVMWFVIHNFWDLNIWLAGMSLKSFCKLIVAGVVLSMATPGLALLPTKFKFLTEVALISHALLLCHIENRFFNYSSIYYYGLEDDVMYPSYMVIVTTFLGLTLVRRLTVDNRIGSRAVWILTCLYTSKLAMLFITSKAVVWVSAVLLLAVSPPLLLYKEKSKTSSKMKPWQGYVHVIVVSVAVWFCREAIFESLQLWHGKPPSDGLLLGFCIILIGLACIPIVAFHFSHVLFARRCLVLVVATGLLFILLQPPMPLSWTYNFDVIKAAHQTGDDISIYGFITSKPTWPSWLLILAILLTLAAVTSFIPIKYIVELRTFYSIAVGIAVGIYISFEYFPQSWILQALIVLTMMCTSVFVVFTHFPSALSTKALPWVFALLVALFPVTYLLEGQVRINSLMEDGDVTDEQQKLTALLAVEGARTSLLGLYAAIFMLIGLEMKFELASLMWEKAHEKGSLKQTQSGHISSVNFPAKMRFLQQRRVSSVPTFTMKRIAAEGAWMPAVGNVATVMCFAICLILNVNLTGGSNRAIFLLAPILLLLNQDSDFVSGFGDKQRYFPVTVVISSYLVLTALHRVWEEVWHGNAGWGLEIGGPDWFFAVKNVALLILTFPSHILFNQFVWSYTKQKDTAPLLTLPLNLPTIIITDVIKVKILGLLGVIYSLAQYLISRQQYISGLKYI*

Click here to download the sequence:
Link to NCBI Protein BLAST