Transcript Information: R_Transcript_3181.p1


Annotated TAIR IDAT3G02540.1
Annotated Gene NameRad23 UV excision repair protein family
Annotated Gene Symbol(s)RAD23-3, RAD23C
Annotation TypeOrtholog
Chromosome Positionchr3:533095-536151 | Reverse length=419
E-Value2.2E-186
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 153.144936842897
Replicate 240.799126914196
Replicate 343.30579023441
Condition 2: 8 Hour
Replicate 138.14640012834
Replicate 239.82590744767
Replicate 351.588788078994
Condition 3: 24 Hour
Replicate 146.737262293031
Replicate 241.881775830107
Replicate 346.908807097393


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3181.p1 GENE.R_Transcript_3181~~R_Transcript_3181.p1 ORF type:5prime_partial len:475 (+),score=125.74,UBA|PF00627.27|8.4e-15,UBA|PF00627.27|7e+03,UBA|PF00627.27|2.2e-12,XPC-binding|PF09280.7|8.1e-23,ubiquitin|PF00240.19|4.7e-17 R_Transcript_3181:3-1427(+)
CTCTCTCAACTTGTAATAAGTTGTAAACATCTCTCAACTCCTATATACAAAGAAAACACAAAAGAGAGAGAAAAAAACATAATCAGCCACTTTCAACACTCTCTCTCCCTTACTTTTCTCTCTCCTCCGCGACTCTACTCCGGCGACGACGACGACGGCCGTACGGAGGAGCAAATCAAGATGAAAATCTTCGTCAAGACTCTCAAGGGCACCAACTTCGAGATCGAAGCCAATCCCGATGACACTGTTGCAGATGTGAAGAAAAATATTGAAAGTGTGCAAGGTGCAGATGTCTACCCTGCTAACCAACAGATGCTCATCCACCAGGGAAAGGTTCTTAAAGATACAACAACATTGGGAGAAAATAATGTTGCTGAGAGTAGTTTTATAGTAATCATGTTATCTAAGAGCAAGCCTGCAGCTGCTGGAGCTTCATCTGCATCTCCTGCACCTGCTGGAGCTTCATCTGCATCTCCTGCACCTGCTGGAGCTTCATCTGCATCTCCTGCACCTGCTAGTCAGGCCCAGCCTCGGAGCGCTACACCCCCTGTTGCCGCGCCAACATCAACTCCTCCCCAAACTCAGCCACAGGCTGCTACAGAACCCAGCCCTGCAGCGCCGACTCCGGCGTCTGTCCAAACCAGTGGTGAAGGAGTTAGGTATGGCCAAGCCGCATCAAATTTAGTTGCAGGAAGCATCTTGGAGGCTACCATTCAGGAGATGCTTGATATGGGTGGAGGCAGCTGGGACAGGGATACAGTTGTTCGTGCTCTACGTGCTGCATATAACAACCCTGAAAGGGCTGTTGAATATTTATACTCTGGAATTCCTGAGGAAACTGAAGCTCCTCCAGTTGCTCGAGCACCTGCTGCTGCTCCTACGGCTACGGGTGGGCAGACCGCTAACCCTCAGGCTCAAGCTCCTCCAGCAGCTGGATCTGTTCCATCAACAGGTCCTAATGCAAGCCCTTTAGATCTCTTTCCTCAGGGGCTTCCTAGTGTGGGTTCAAATGCTGGTGCTGGCTCTTTGGATTTCCTTCGCAATAGTCAGCAGTTTCAAGCATTGCGAGCTATGGTGCAAGCCAACCCCCAGATTTTGCAGCCTATGCTTCAAGAACTGGGGAAGCAGAATCCACAGCTGATGCGGCTCATTCAAGATCATCAAGCTGATTTTCTTCGCCTGATTAACGAACCTGTTGAAGGAGAAGGGAACCTCCTCTCGCAGTTGGCCTCTGCAATGCCACCAACTGTATCCGTCACACCTGAGGAGCGTGAAGCCATTGAACGCCTCGAAGCCATGGGGTTCAGACGGGCCACGGTTCTGCAAGTTTATTTTGCATGCAATAAGAATGAGGAGTTGGCAGCAAATTATCTCTTAGATCATATGGACGAGTTTGAGAATGAAGACGATGAGGGGCTTTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3181.p1 GENE.R_Transcript_3181~~R_Transcript_3181.p1 ORF type:5prime_partial len:475 (+),score=125.74,UBA|PF00627.27|8.4e-15,UBA|PF00627.27|7e+03,UBA|PF00627.27|2.2e-12,XPC-binding|PF09280.7|8.1e-23,ubiquitin|PF00240.19|4.7e-17 R_Transcript_3181:3-1427(+)
LSQLVISCKHLSTPIYKENTKEREKNIISHFQHSLSLTFLSPPRLYSGDDDDGRTEEQIKMKIFVKTLKGTNFEIEANPDDTVADVKKNIESVQGADVYPANQQMLIHQGKVLKDTTTLGENNVAESSFIVIMLSKSKPAAAGASSASPAPAGASSASPAPAGASSASPAPASQAQPRSATPPVAAPTSTPPQTQPQAATEPSPAAPTPASVQTSGEGVRYGQAASNLVAGSILEATIQEMLDMGGGSWDRDTVVRALRAAYNNPERAVEYLYSGIPEETEAPPVARAPAAAPTATGGQTANPQAQAPPAAGSVPSTGPNASPLDLFPQGLPSVGSNAGAGSLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLMRLIQDHQADFLRLINEPVEGEGNLLSQLASAMPPTVSVTPEEREAIERLEAMGFRRATVLQVYFACNKNEELAANYLLDHMDEFENEDDEGLS*

Click here to download the sequence:
Link to NCBI Protein BLAST