Transcript Information: R_Transcript_31812.p1


Annotated TAIR IDAT1G09760.1
Annotated Gene NameU2 small nuclear ribonucleoprotein A
Annotated Gene Symbol(s)U2A'
Annotation TypeOrtholog
Chromosome Positionchr1:3159476-3161603 | Reverse length=249
E-Value1.1E-132
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.94825169518
Replicate 244.390102264215
Replicate 353.422633701753
Condition 2: 8 Hour
Replicate 140.668564618262
Replicate 241.549458646078
Replicate 345.22200569785
Condition 3: 24 Hour
Replicate 159.658523280297
Replicate 252.19998990019
Replicate 357.862305815881


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31812.p1 GENE.R_Transcript_31812~~R_Transcript_31812.p1 ORF type:complete len:289 (+),score=67.74,LRR_9|PF14580.2|1.1e-63,LRR_8|PF13855.2|23,LRR_8|PF13855.2|16,LRR_8|PF13855.2|1.4e-05,LRR_8|PF13855.2|4.6e-05,LRR_8|PF13855.2|0.0068,LRR_4|PF12799.3|4.3,LRR_4|PF12799.3|6.4,LRR_4|PF12799.3|0.012,LRR_4|PF12799.3|0.0039,LRR_4|PF12799.3|0.059 R_Transcript_31812:244-1110(+)
ATGGTGAGGCTAACTGCGGATTTGATATGGAAGAGTCCTCATTTCTTCTTCAATGCCATTAAAGAGCGCGAATTGGATCTTCGAGGAAATAAGATTGCAGTTATTGAGAACTTGGGTACCACTGAGGATCAATTTGATACAATTGATTTGTCAGACAATGAGATCGTAAAACTTGAGAACTTCCCTTACTTAAACAGGCTGGGAACTTTGCTACTCAACAACAATAGAATCACCCGTATAAACCCAAACATCGGAGAGTTTTTGCCCAAACTGCATAGTCTGGTTCTAACAAACAATCGATTGGTTAACTTGGCTGAGATTGATCCGCTCGCATCCCTTCCAAAACTGCAATTTCTTAGTCTTCTGGACAACAATATTACTAAAAAGCCAAATTATCGCTTGTATGTCATTCACAAATTGAAATCGCTACGAGTACTAGACTTCAGGAAAGTTAAACAAAAGGAACGTGTTGAGGCAAATAATCTATTTGCATCCAAGGAGGCTGAAGATGAGGCCAAAAAAATAGCTGTGAAGACATTCACACCTGGTGAAGTACCTGTCGTTGAGGAGGCTCCAAAAGAAGAGAATGTACCTAAATCTACTGCTCCTACACCAGAGCAAATTATAGCTATCAAGGCTGCTATTGTCAATTCCCAAACACTCGAAGAAGTTGCTAGGCTTGAGAAGGCACTGAAGTCGGGCCAAATCCCAGCTGATCTGCAGATCCCTGATACTGAAGCACCTAATAATGGTGCAGATACCCAAGATGAGAAGATGGTGACCGACAGTAAAAATGAAATGGATGCAAAAGAGGATGCTGAGCCTGTCAGCAAGGGTGATGAACCCGAAGCAATGGATGAAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31812.p1 GENE.R_Transcript_31812~~R_Transcript_31812.p1 ORF type:complete len:289 (+),score=67.74,LRR_9|PF14580.2|1.1e-63,LRR_8|PF13855.2|23,LRR_8|PF13855.2|16,LRR_8|PF13855.2|1.4e-05,LRR_8|PF13855.2|4.6e-05,LRR_8|PF13855.2|0.0068,LRR_4|PF12799.3|4.3,LRR_4|PF12799.3|6.4,LRR_4|PF12799.3|0.012,LRR_4|PF12799.3|0.0039,LRR_4|PF12799.3|0.059 R_Transcript_31812:244-1110(+)
MVRLTADLIWKSPHFFFNAIKERELDLRGNKIAVIENLGTTEDQFDTIDLSDNEIVKLENFPYLNRLGTLLLNNNRITRINPNIGEFLPKLHSLVLTNNRLVNLAEIDPLASLPKLQFLSLLDNNITKKPNYRLYVIHKLKSLRVLDFRKVKQKERVEANNLFASKEAEDEAKKIAVKTFTPGEVPVVEEAPKEENVPKSTAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQIPADLQIPDTEAPNNGADTQDEKMVTDSKNEMDAKEDAEPVSKGDEPEAMDEA*

Click here to download the sequence:
Link to NCBI Protein BLAST