Transcript Information: R_Transcript_3182.p1


Annotated TAIR IDAT3G23280.1
Annotated Gene NameXB3 Ortholog 5 in Arabidopsis thaliana
Annotated Gene Symbol(s)XBAT35
Annotation TypeOrtholog
Chromosome Positionchr3:8321588-8324109 | Forward length=462
E-Value1.2E-175
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.097470693301
Replicate 211.227495380505
Replicate 314.033390822064
Condition 2: 8 Hour
Replicate 116.341093027951
Replicate 219.77172710168
Replicate 331.946834691881
Condition 3: 24 Hour
Replicate 117.689594621768
Replicate 213.140291086386
Replicate 319.906291420504


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3182.p1 GENE.R_Transcript_3182~~R_Transcript_3182.p1 ORF type:complete len:475 (+),score=102.36,Ank_2|PF12796.3|3.1e-10,Ank_2|PF12796.3|5.4e-07,Ank_5|PF13857.2|0.79,Ank_5|PF13857.2|1.8e-09,zf-C3HC4_3|PF13920.2|6.3e+03,zf-C3HC4_3|PF13920.2|1e+04,zf-C3HC4_3|PF13920.2|2e-13,Ank_4|PF13637.2|1.4,Ank_4|PF13637.2|0.062,Ank_4|PF13637.2|4.8e-05,Ank|PF00023.26|0.009,Ank|PF00023.26|0.00021,Ank|PF00023.26|3.1e+03,Ank_3|PF13606.2|7.6e+03,Ank_3|PF13606.2|0.28,Ank_3|PF13606.2|0.00039,Ank_3|PF13606.2|9.9e+03 R_Transcript_3182:214-1638(+)
ATGGGGCAGCAACAATCAAAGGAAGAATTGTTGTACCATCAGGTATCATATGGAAATACTGAGGGAATCAAAGCTCTCCATAGAGATGGTGCTGGTCTTGAGTATGTGGATTGTGAAGGAAAGACTCCTCTAATTGCTGCTTGTATGAATCCGACACTATTTAATGTTGCTAAAACTCTTATAGAGTTGGGAGCCAATGTCAATGCCTATCGCCCAGGTCGACATGGAGGGACACCTTTACATCATGCTGCGAAACGAGGTCTGGGGAATACAGTGAAGTTACTTCTTTCACATGGAGCCAATGCTTTATTGGTGAATGATGATTGTCAAACCCCATTAGATGTTGCCAGAGCCAAAGGCTACAGCAATGTTGTTCGCATAATAGAGAGTCACATCTGCTTATATTCTGGTTGGTTGCTGGAGCTTTATGGCCCTGACATTTTGGAACTCCTAGCTCCACAGCTCCTTTCAAGAAAAGTCTGGGCAGTGGTTGTTCCATGTGGTTCTCGTAATCTTAGAAAGCCTTTCAAATTGGAGCTTGCAATATATGCAAGTACACAGGATGCTCAACCTCGTACAACTATTTCTTTGTGGAGGGCCAATATGGAGGAACCAGCTTTTAACCAGCCTGATCCCGCAGTGATAATTTCTGAGACATCTATTTCAAGACGTGGGAGGTGGAGGAGATGTAGGCCTCGACATGTTAGTCAGACGCGCATCAAACTTGCTGCAGTTAACGTAAGTGACAAGCAACAGCTTCAGCAGTTTTGTAGTGCATGCAAGGGAATTCCACAGGTGATGCATTCAACTTTCCCCTTCAACACTGCTACTCCGGTTGTTCCAGCAACTGCCCCACCACCTGCTGAAGAAGATAAAGAGCTTGCAATGGCAATAAATGCCTCTCTTCAGACTGCTATGCAAGAGAGTATTCCCCTTGGCTATGCACAGGAGACATCCGGAGCAAGTTCATCTTCTAGCTTGGTTAATTCTATGTCTACAAATAATCAAAGTGAACCCACTTTCATAAAAGGAAATTGCACGGTAGAGACCGTTGATGAAGCTGGGCCCAGCAATGCTACAGCAGTAACAAGTGACAACACTCGAGCACCAATGCCCATACCATCAGCTCCAACTATGACAGATGAGGTTCCAGACGATGGGGCTATTCATTATCCATCCATTGATACCAGCCTTCTTGATTTATCCGAACCATTGGTGGAGAAGAACCATACTGATGAAGATCAAAGCAAGAAAGAAGGATCTTCTTGTGTGATATGCTTTGATGCTCCAGTTGAGGGAGCTTGCATACCTTGTGGCCACATGGCTGGATGTATGTCCTGTTTGAATGAGATAAAGGCGAAAAAATGGGGGTGCCCTGTTTGCCGTACCAACATTGACCAAATCATAAGGGTCTATGCTGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3182.p1 GENE.R_Transcript_3182~~R_Transcript_3182.p1 ORF type:complete len:475 (+),score=102.36,Ank_2|PF12796.3|3.1e-10,Ank_2|PF12796.3|5.4e-07,Ank_5|PF13857.2|0.79,Ank_5|PF13857.2|1.8e-09,zf-C3HC4_3|PF13920.2|6.3e+03,zf-C3HC4_3|PF13920.2|1e+04,zf-C3HC4_3|PF13920.2|2e-13,Ank_4|PF13637.2|1.4,Ank_4|PF13637.2|0.062,Ank_4|PF13637.2|4.8e-05,Ank|PF00023.26|0.009,Ank|PF00023.26|0.00021,Ank|PF00023.26|3.1e+03,Ank_3|PF13606.2|7.6e+03,Ank_3|PF13606.2|0.28,Ank_3|PF13606.2|0.00039,Ank_3|PF13606.2|9.9e+03 R_Transcript_3182:214-1638(+)
MGQQQSKEELLYHQVSYGNTEGIKALHRDGAGLEYVDCEGKTPLIAACMNPTLFNVAKTLIELGANVNAYRPGRHGGTPLHHAAKRGLGNTVKLLLSHGANALLVNDDCQTPLDVARAKGYSNVVRIIESHICLYSGWLLELYGPDILELLAPQLLSRKVWAVVVPCGSRNLRKPFKLELAIYASTQDAQPRTTISLWRANMEEPAFNQPDPAVIISETSISRRGRWRRCRPRHVSQTRIKLAAVNVSDKQQLQQFCSACKGIPQVMHSTFPFNTATPVVPATAPPPAEEDKELAMAINASLQTAMQESIPLGYAQETSGASSSSSLVNSMSTNNQSEPTFIKGNCTVETVDEAGPSNATAVTSDNTRAPMPIPSAPTMTDEVPDDGAIHYPSIDTSLLDLSEPLVEKNHTDEDQSKKEGSSCVICFDAPVEGACIPCGHMAGCMSCLNEIKAKKWGCPVCRTNIDQIIRVYAV*

Click here to download the sequence:
Link to NCBI Protein BLAST