Transcript Information: R_Transcript_31854.p1


Annotated TAIR IDAT1G30900.1
Annotated Gene NameVACUOLAR SORTING RECEPTOR 6
Annotated Gene Symbol(s)VSR6, VSR3;3, BP80-3;3
Annotation TypeOrtholog
Chromosome Positionchr1:10997275-11000543 | Forward length=631
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.245900114282
Replicate 25.9705119667198
Replicate 38.3955183606751
Condition 2: 8 Hour
Replicate 16.9241229471673
Replicate 29.8910693768277
Replicate 314.509818284227
Condition 3: 24 Hour
Replicate 112.222402900057
Replicate 210.383044469814
Replicate 313.035805161075


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31854.p1 GENE.R_Transcript_31854~~R_Transcript_31854.p1 ORF type:complete len:633 (+),score=124.58,PA|PF02225.18|4.1e-15,PA|PF02225.18|1.9e+02 R_Transcript_31854:350-2248(+)
ATGGATTACTTCCATTTGAAGGGAAAGTTTGCAGTTTTGTTGTTGCTGGTGTTAATGGTGGTTGTAAAGGGTCGGTTTGTAGTGGAGAAGAACAGCATAACAGTATTGCATCCCTACAACATGAAGTCAAAACATGATGGTTCTATTGGTAATTTTGGGGTACCTGAGTATGGAGGTTCTATGATCGGTTCTGTGGTTTACCCTTCTAATGGTTCTGATGCCTGTAAAGCTTTCGATGGCGATAAACCTTTCAAGTCTCCTTCAACTCGCCCCACTATTCTTCTCGTTGACCGTGGAGAGTGCTACTTTGCACTGAAAGCATGGAATGCACAACAAGCTGGAGCAGCAGCTGTATTAGTTGCAGATAGCATCGATGAGCCTTTAATTACTATGGATTCTCCTGAGGAGAGCAAGGATGCAGATGGATTCATAGACAAGATCACAATCCCTTCAGTTCTTATAGAAAGAAGTTTTGGCGATAGCATAAAGGATGCCTTAAAGCATGGGAATGAAGTTGTTTTAAAATTGGACTGGTCAGATTCAATACCAAACCCAGATGGAAGGGTTGAGTACGAGCTGTGGACCAATAGTAATGACGAATGTGGGGTCCGCTGTGACGAACAAATGAAATTCATCAGGGAATTTAAGGGCCATGCTCAAATTCTTGAGAAGGGTGGATATACCCTTTTTATCCCCCACTACATAACTTGGTATTGTCCCCAACCTTTTCTTCACAGTAGCCAGTGCAAGTCCCAATGCATAAACCATGGCAGGTATTGTGCTCCTGACCCTGAGCAGGATTTTGGGGTTGGATATGAAGGGAAAGATGTTGTGCTTGAGAACTTGAGGCAGCTCTGTGTTCATCGAGCTGCTAAAGAAGAAAATAGGTCTTGGGTTTGGTGGGATTATGTCACAGATTTCCATATTAGATGTTCCATGAAAGAGAACAAGTACAGCAAAACTTGTGCTGAGGATGTGTTGAAGTCTCTTAATCTGCCTATAGATAAGATAAAAAAGTGCATAGGGGATCCAGAAGCTGATGTTGAGAATGAGGTTCTGAAAAATGAACAAGATAAACAGGTTGGACAAGGATCTCGTGGTGATGTTACTATTTTACCTACATTGGTTATCAACGATGTGCAATACAGAGGCAAAATTGAGAGAGCTGCGGTACTGATTGCCCTGTGCGCTGCCTTCAAGGAGACAACTGACCCTCCACTTTGCTTGTCGTCAGATATTGAGACTAATGAGTGTTTGGAAAACAATGGCGGTTGCTGGCAGGACCAACAAGGCAATATAACTGCTTGCAAGGACACATTCAGGGGAAAGGTGTGTGTGTGTCCTCTTGTACATGGCGTTCAGTATCAAGGAGATGGTTACACATCTTGTAAAGCTGTTGGTCCAGGAAGGTGCAGCATAAACAATGGTGACTGCTGGTCGGAAACGAGGAACGGAAAAACGTTCTCAGCTTGCACAGATTCTGAAATTTCCGGTTGCAAGTGCCCAGAAGGCTTTAGGGGAGATGGTCACAAGTGTGAAGACTTGGATGAATGCAAGGAACGTAGTGCTTGCCAGTGCAAAGAGTGCAGCTGCAAGAATACATGGGGTGGATATGATTGCAAATGCCAAGGGAATCACTTATACATCAAGGACCATGATACTTGCATTGAAAGAAGCTCCTCGAAATTCAGGTGGTTCGCATCTCTCTTAGTTATAGCAGTTGTGGTTGGTGCTAGCTTACTTGGTTACATATTCTACAAGTACAGGCTCAGGTCGTACATGGACACTGAGATCATGGCTATTATGTCACAGTATATGCCTCTTGATGGCCAATATGCAAGAAATATTGATGGCCGTAATTCTGAGGCTGAACCTTTACAACAACAACCTTCAGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31854.p1 GENE.R_Transcript_31854~~R_Transcript_31854.p1 ORF type:complete len:633 (+),score=124.58,PA|PF02225.18|4.1e-15,PA|PF02225.18|1.9e+02 R_Transcript_31854:350-2248(+)
MDYFHLKGKFAVLLLLVLMVVVKGRFVVEKNSITVLHPYNMKSKHDGSIGNFGVPEYGGSMIGSVVYPSNGSDACKAFDGDKPFKSPSTRPTILLVDRGECYFALKAWNAQQAGAAAVLVADSIDEPLITMDSPEESKDADGFIDKITIPSVLIERSFGDSIKDALKHGNEVVLKLDWSDSIPNPDGRVEYELWTNSNDECGVRCDEQMKFIREFKGHAQILEKGGYTLFIPHYITWYCPQPFLHSSQCKSQCINHGRYCAPDPEQDFGVGYEGKDVVLENLRQLCVHRAAKEENRSWVWWDYVTDFHIRCSMKENKYSKTCAEDVLKSLNLPIDKIKKCIGDPEADVENEVLKNEQDKQVGQGSRGDVTILPTLVINDVQYRGKIERAAVLIALCAAFKETTDPPLCLSSDIETNECLENNGGCWQDQQGNITACKDTFRGKVCVCPLVHGVQYQGDGYTSCKAVGPGRCSINNGDCWSETRNGKTFSACTDSEISGCKCPEGFRGDGHKCEDLDECKERSACQCKECSCKNTWGGYDCKCQGNHLYIKDHDTCIERSSSKFRWFASLLVIAVVVGASLLGYIFYKYRLRSYMDTEIMAIMSQYMPLDGQYARNIDGRNSEAEPLQQQPSV*

Click here to download the sequence:
Link to NCBI Protein BLAST