Transcript Information: R_Transcript_318842.p1


Annotated TAIR IDAT5G15280.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4962293-4965976 | Forward length=1227
E-Value6E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.38525321864767
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.16652853780172
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_318842.p1 GENE.R_Transcript_318842~~R_Transcript_318842.p1 ORF type:internal len:109 (+),score=18.57,PPR_2|PF13041.2|68,PPR_2|PF13041.2|0.15,PPR_2|PF13041.2|4e-06,PPR_1|PF12854.3|4.8e+03,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|14 R_Transcript_318842:3-326(+)
AGTGCAGTGGTTATAAGTGAGGTTTCAAATGTGTATTGTGAGAAGAAGGATTTTGAGGATCTTCCATGTTTCTTCGTTGAGATGAAAAGTGTTCCAGATATCTTGGTTGGTAATAAAATTTTATCATCCTTGGCTTGCCATTTTGGAATAGAAATAGCAGATTCCTTTTTGTGGGATTTAGAGAATTTGGGTTTCATTCCTAATGAGATAACATTTGGGATCTTAATTAGTTGGAGTTGCCTTGGTGGGAAGTTAAGAGATGCCTTTGTGTATCTGTCTATGATCTTGTCCAGAGGCCTGAAACCTGATAGATACTCTTATAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_318842.p1 GENE.R_Transcript_318842~~R_Transcript_318842.p1 ORF type:internal len:109 (+),score=18.57,PPR_2|PF13041.2|68,PPR_2|PF13041.2|0.15,PPR_2|PF13041.2|4e-06,PPR_1|PF12854.3|4.8e+03,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|14 R_Transcript_318842:3-326(+)
SAVVISEVSNVYCEKKDFEDLPCFFVEMKSVPDILVGNKILSSLACHFGIEIADSFLWDLENLGFIPNEITFGILISWSCLGGKLRDAFVYLSMILSRGLKPDRYSYN

Click here to download the sequence:
Link to NCBI Protein BLAST