Transcript Information: R_Transcript_319197.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value4E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.1341616640019
Replicate 30
Condition 2: 8 Hour
Replicate 10.15645920094086
Replicate 20.071440517064491
Replicate 30.057992366199319
Condition 3: 24 Hour
Replicate 10.073347626925572
Replicate 20
Replicate 30.41957261380634


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_319197.p1 GENE.R_Transcript_319197~~R_Transcript_319197.p1 ORF type:internal len:313 (+),score=38.33,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|4.7e+03,zf-RVT|PF13966.2|5.6e-18,zf-RVT|PF13966.2|3.3e+03 R_Transcript_319197:2-937(+)
AGAGTTACATGGTCTAGAGTGGATTGGATTACAAGCTATTATATTTATCAGGCTTCCATCTTGGTAGTTCAGCCTCGGCAAGGTGATTCGTGGGCTTGGAAAAACTTACTAAAAATCAGGGATGAGTTTCTTCATCAAGCTGGTAGTGCTCCTGCTGCGATTAAACTGATTCTTGATTGGGGTGATCGTTCTTCCAAATTCTATTCTTTCTTTCAAAAGGGGAGCCAGAGAGTTACATGGTCTAGAGTGGATTGGATTACAAGCTATTATATTTATCAGGCTTCCATCTTGGTAGTTCAGCCTCGGCAAGGTGATTCGTGGGCTTGGAAAAACTTACTAAAAATCAGGGATGAGTTTCTTCATCAAGCTGGTAGTGCTCCTGCTGCGATTAAACTGATTCTTGATTGGGGTGATCGTTCTTCCAAATTCTATTCTTTCTTTCAAAAGGGGAGCCAGAGAGTTACATGGTCTAGAGTGGTTTGGGACTCTGTTAATACTCCTAAACACTCTGTGATCGTTGTTTTGGCCATTCACAATGCTCTTCCTACTCTTGATAATCTGATTCGAAGAGGTCTTTTCTTTGTTAATCGATGTACTCTCTGTCAGCACCAGATGGAATCAGTCCAACATCTCTTTTTTGCTTGTAACTTTGCTCAATCTGTTTGGCAACAGATTCTGCTCTGGCCTGGATTTACTCGCCGTGCCAAAAGTTTGAAAGGTGAGTTGAAATGGCAACTCAAACATGCCCGAGGAAAGCATTGGAAGAAGTGGTGGCAGTGTTGTGCACTTATCTCTACTGTGTATGAGCTGTGGTATGAGCGTAATTCCAGGATTTTTGTCGAGAAAACTTGGTCTGATCAACAGCTTGTTCATCGGAACAAATTTCTTGTTTGTGTTAGAATGCTACACTCTTGTAAAGCTCCTGATATGTATCTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_319197.p1 GENE.R_Transcript_319197~~R_Transcript_319197.p1 ORF type:internal len:313 (+),score=38.33,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|4.7e+03,zf-RVT|PF13966.2|5.6e-18,zf-RVT|PF13966.2|3.3e+03 R_Transcript_319197:2-937(+)
RVTWSRVDWITSYYIYQASILVVQPRQGDSWAWKNLLKIRDEFLHQAGSAPAAIKLILDWGDRSSKFYSFFQKGSQRVTWSRVDWITSYYIYQASILVVQPRQGDSWAWKNLLKIRDEFLHQAGSAPAAIKLILDWGDRSSKFYSFFQKGSQRVTWSRVVWDSVNTPKHSVIVVLAIHNALPTLDNLIRRGLFFVNRCTLCQHQMESVQHLFFACNFAQSVWQQILLWPGFTRRAKSLKGELKWQLKHARGKHWKKWWQCCALISTVYELWYERNSRIFVEKTWSDQQLVHRNKFLVCVRMLHSCKAPDMYL

Click here to download the sequence:
Link to NCBI Protein BLAST