Transcript Information: R_Transcript_31958.p1


Annotated TAIR IDAT1G72440.1
Annotated Gene NameCCAAT-binding factor
Annotated Gene Symbol(s)EDA25, SWA2
Annotation TypeOrtholog
Chromosome Positionchr1:27268325-27273596 | Reverse length=1043
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9033949588792
Replicate 21.4979816671277
Replicate 32.7595251139225
Condition 2: 8 Hour
Replicate 13.4652510627095
Replicate 21.5430316124327
Replicate 32.7598940124565
Condition 3: 24 Hour
Replicate 14.1619416611627
Replicate 23.0696793075774
Replicate 34.6079378288205


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31958.p1 GENE.R_Transcript_31958~~R_Transcript_31958.p1 ORF type:3prime_partial len:855 (+),score=231.98,CBF|PF03914.13|2.2e+02,CBF|PF03914.13|1.2e-50 R_Transcript_31958:129-2690(+)
ATGGCAAACACCAAACCCAAGAAAACCTCCCAATCGAAATCAAAACCCAAAGAAGACGACCTTGACAAAATCCAATCTGATGTAGCTTCATTTGCATTCTCTCTTGGTCTTGCTTCTTCTTCTCTCCCTTCTGGTTTCAATGACACTGATTTCAGACCCAAAAAGAAACCCCCCAATCAACAACAACAAAACCCTAAACCAACAACCCAGAACAAAACCAAAAACCCCACTTCCCAAAAGCCTCAATTTGAAAAACCCACATCAAAAGAAGATCAAGTCTTTGTCGGTAACTTCAAGTCATCATTTGATAAGTTCAAGAACCTTACTAAACTTCCTTTGATTAAAGCTAGTGTCTTGGGGGCATGGCATGAGGATGAGGCTGAGCTGGAGGCCAAAGTTTTGGGGGAAGAAAGAAGGAACAAGTTGGAAATTCGGAATGCTGAGGAATGGAAGAAATCGGTTGATAAGAAGAAAGAGCTTGGGGAAAGGTTGTTGGGTCAGTATGCATTGGATTATGAGGCTTCAAGGGGTCAAAGTGGTGATATCAAGATGCTTATTGCCACTCAAAGGTCTGGGACTGCTGCTGATAAGGTTTCGGCTTATTCGGTTTTGATTGGAGATAACCCCATTGCCAATATGAGATCACTTGATGCTCTTTTGGCCATGGTAACATCAAAGGTTGGGAAACGTCATGCTCTAACAGGCTTTGAAGCTCTAAAAGAGTTGTTTCTACAAAGTTTGTTGCCTGACTGTAAATTGAAGACCCTCTTCCAGCAACCCCTTAGCCATCTTCCTGAAACAAAAGATGGTTACTCTCTTCTAATGTTCTGGTACTGGGAGGAATGCTTAAAATTAAGGTATGAACGGTTTGTTTCTGCTCTTGAAGAGGCATCAAGGGACATGTTGCCTATACTAAAAGACAAGGCATTGAAGATAATGTATGCACTTATAAGAAGTAAATCAGAACAAGAGCGAAAGTTACTCACTGCCTTGGTCAACAAGCTTGGGGATCCTAACAGCAAGGCTGCATCAAATGCCGACTATTATTTGACTAACCTTCTGTCTGATCATCCAAACATGAAGGTGGTGGTGATTGATGAGGTGGACTCATTTTTATTTCGCCCACATCTGGGATTGCGTGCTAAGTATCACGCAGTTAATTTTTTGAGTCAAATTCGCTTGAGTCAGAAGGGGGATGGGCCTAAGGTGGCAAAACGGCTGGTAGATGTATATTTTGCACTATTTAAGGTATTGATCTCTGTGGCAGCTAGTGGTGAAAAAGCCAAGGTTACAGAGACGAAGAAAGGTTCTAACAAGGACAACAAAGTGCAGTATATGTCTGAATCTCACGTGGAATTGGATTCACGACTTTTGTCTGCACTTCTATCAGGTGTAAACAGGGCATTTCCTTTTGTATCTGGGGACGAAGCGGATGAAGTTGTTGATGTTCAAACTCCAATGCTTTTCCAGCTTGTTCATTCACAAAACTTCAATGTCGGCATCCAGGCATTAATGCTTCTTGATAAAATTTCATCAAAAAATCAGGTTGTCAGTGATAGATTTTATCGTGCCTTGTATGCAAAATTGCTAATTCCTGCTGCCTTGAACACCTCTAAGGCAGAGATGTTTATTGGACTACTGTTGAGAGCTATGAAGAATGATATAAATTTAAAGCGTGTAGCTGCCTTCTCAAAACGTCTTCTACAGGTAGCTCTTCAGCAACAACCTCAGTATGCATGTGGGTGTCTGTTTCTCCTCTCTGAAGTTCTGAAAGCAAGGCCACCTTTGTGGAATATGGCAATCCAAAATGAGGCTGTTGATGAAGATCTTGAGCATTTTGAAGATGTGCCTGATGAAACTGAGAATCCACCTGTTATTGATGCTGAGGTGCCACAAAGAAATGACGGTGATACAGGTAGAACTAGTGACCCTGAAAGTGATTCCTCAGAAGACGAGGGAGCCTCTTCAGCATCGTCTTCTGAGGAAGATGAAGATGAGAATTTACTTGTCAAAACAAATGTCGAGGAATTCCAGGAATCCAACTCGAAGTTGTCTGAGCACCTTCAGGAATCGTCTACCAAGCTCTCGCTACCTGGAGGATATGATCCTCGGCGTAGAGAACCTTCATTCTGCAATGCAGACCGTACAAGCTGGTGGGAACTTACTGTACTTGCCTCTCACACTCACCCATCAGTATCAACCATGGCAAAGACACTTCTTTCTGGTGCAAATATCGTCTACAATGGCAACCCATTGAACGATCTTTCCCTGACTGCTTTTCTAGACAAATTCATGGAAAAGAAGCCTAAGCAGAGCACATGGCATGGTGGCTCACAAATCGAACCAGCTAAGAAGCTTGATATGAACAAGCATTTGATTGGGCCTGAAATCCTTTCATTGGCTGAAGATGATGTGCCCCCTGAAGACGTTATCTTTCATAAGTTCTACATGAACAAGATGAGTACATCAACCAAGCCAAAGAAGAAAAAGAAGAAGAAGAAGGCAGCTGAAGAAGAGGAAGCAGAGGACTTGTATGGTGGAGATGAGAGTGATAATGAAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31958.p1 GENE.R_Transcript_31958~~R_Transcript_31958.p1 ORF type:3prime_partial len:855 (+),score=231.98,CBF|PF03914.13|2.2e+02,CBF|PF03914.13|1.2e-50 R_Transcript_31958:129-2690(+)
MANTKPKKTSQSKSKPKEDDLDKIQSDVASFAFSLGLASSSLPSGFNDTDFRPKKKPPNQQQQNPKPTTQNKTKNPTSQKPQFEKPTSKEDQVFVGNFKSSFDKFKNLTKLPLIKASVLGAWHEDEAELEAKVLGEERRNKLEIRNAEEWKKSVDKKKELGERLLGQYALDYEASRGQSGDIKMLIATQRSGTAADKVSAYSVLIGDNPIANMRSLDALLAMVTSKVGKRHALTGFEALKELFLQSLLPDCKLKTLFQQPLSHLPETKDGYSLLMFWYWEECLKLRYERFVSALEEASRDMLPILKDKALKIMYALIRSKSEQERKLLTALVNKLGDPNSKAASNADYYLTNLLSDHPNMKVVVIDEVDSFLFRPHLGLRAKYHAVNFLSQIRLSQKGDGPKVAKRLVDVYFALFKVLISVAASGEKAKVTETKKGSNKDNKVQYMSESHVELDSRLLSALLSGVNRAFPFVSGDEADEVVDVQTPMLFQLVHSQNFNVGIQALMLLDKISSKNQVVSDRFYRALYAKLLIPAALNTSKAEMFIGLLLRAMKNDINLKRVAAFSKRLLQVALQQQPQYACGCLFLLSEVLKARPPLWNMAIQNEAVDEDLEHFEDVPDETENPPVIDAEVPQRNDGDTGRTSDPESDSSEDEGASSASSSEEDEDENLLVKTNVEEFQESNSKLSEHLQESSTKLSLPGGYDPRRREPSFCNADRTSWWELTVLASHTHPSVSTMAKTLLSGANIVYNGNPLNDLSLTAFLDKFMEKKPKQSTWHGGSQIEPAKKLDMNKHLIGPEILSLAEDDVPPEDVIFHKFYMNKMSTSTKPKKKKKKKKAAEEEEAEDLYGGDESDNEE

Click here to download the sequence:
Link to NCBI Protein BLAST