Transcript Information: R_Transcript_319647.p1


Annotated TAIR IDAT1G09220.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:2977952-2979466 | Reverse length=504
E-Value5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29679611308486
Replicate 20.34140325880159
Replicate 30.18623363899311
Condition 2: 8 Hour
Replicate 10
Replicate 20.18179578732671
Replicate 30
Condition 3: 24 Hour
Replicate 10.55994651774888
Replicate 20
Replicate 30.35589763718532


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_319647.p1 GENE.R_Transcript_319647~~R_Transcript_319647.p1 ORF type:3prime_partial len:123 (+),score=-4.90,PPR_2|PF13041.2|3.5e-06 R_Transcript_319647:64-429(+)
ATGCGAAGTTTAATATTAAGACGCCCCATAATCTGCTATCCCCAGACTACACTATTCCCATATTCCTTTGCTTCATTTTCATCCTATAACCATTCCTTTCAACATTACCACCGACAAGACTTTCTCTCTCTTCTAAAAAACTACCCATTATCACATAATATAAACCTTCAAGTCCACTCTCAGTTGACAACCAGTGGCTTATTGAACCAATTCACAAATACCCAGATCATATTTATCTTCAATACCCTTTTGAGACACTATGCAATTGGTGAATTCCCCCAACAAGCTTTCTCTCTCTACAAACAAGCTCAAAGTTTGACCTTGTACTTTGATAGTTTTACATACTCTTTTCTCATCAAAGCCTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_319647.p1 GENE.R_Transcript_319647~~R_Transcript_319647.p1 ORF type:3prime_partial len:123 (+),score=-4.90,PPR_2|PF13041.2|3.5e-06 R_Transcript_319647:64-429(+)
MRSLILRRPIICYPQTTLFPYSFASFSSYNHSFQHYHRQDFLSLLKNYPLSHNINLQVHSQLTTSGLLNQFTNTQIIFIFNTLLRHYAIGEFPQQAFSLYKQAQSLTLYFDSFTYSFLIKAC

Click here to download the sequence:
Link to NCBI Protein BLAST