Transcript Information: R_Transcript_319687.p1


Annotated TAIR IDAT3G60660.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1395 (InterPro:IPR009829); Has 131 Blast hits to 131 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 83; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:22421481-22423167 | Forward length=272
E-Value3E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9359201012581
Replicate 22.3859432291248
Replicate 32.6030383631991
Condition 2: 8 Hour
Replicate 11.4839918149846
Replicate 21.5246055800808
Replicate 32.2001952267136
Condition 3: 24 Hour
Replicate 13.1306100765051
Replicate 22.5062794193838
Replicate 32.1556072797702


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_319687.p1 GENE.R_Transcript_319687~~R_Transcript_319687.p1 ORF type:5prime_partial len:132 (+),score=35.19,DUF1395|PF07160.8|1.4e-25 R_Transcript_319687:3-398(+)
CAGGACATGTCACTTCATGTTCCTTTTCATTTATCTACTAGAATCCCGTCTTCGCTCCCTGATGCTAATCATCATTTGCAGCCTGATCATTCGATGGATGAGTCGTCCTTTGGTTCATCGATGACCGAGGAGCAACCTGCAATTGTGTTGCCTAAGGAGAAGAAGGGTCGTGGGCCTCCACCAATGTGGTACATTTCTGCGGATGAGCTAGCCTCACTGTCATCTTATATGAGGGGAAGGTTGACCCTGGACAAAGTCAATGCTGCTGTTACTGATATGGCAGCATATGCTGAAGCAACCGCTCAGCTTATCTCAGCCCATATGAAGAAGTTGCCAGAGACCGTGTGGGAGAGAGCCCTGGTGAGTGAACTTTCAACAATTCAGAACACTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_319687.p1 GENE.R_Transcript_319687~~R_Transcript_319687.p1 ORF type:5prime_partial len:132 (+),score=35.19,DUF1395|PF07160.8|1.4e-25 R_Transcript_319687:3-398(+)
QDMSLHVPFHLSTRIPSSLPDANHHLQPDHSMDESSFGSSMTEEQPAIVLPKEKKGRGPPPMWYISADELASLSSYMRGRLTLDKVNAAVTDMAAYAEATAQLISAHMKKLPETVWERALVSELSTIQNTA*

Click here to download the sequence:
Link to NCBI Protein BLAST