Transcript Information: R_Transcript_319776.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value1E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2025651697748
Replicate 24.8732154052642
Replicate 36.108463358974
Condition 2: 8 Hour
Replicate 15.44130332161
Replicate 24.8586607457391
Replicate 37.7984697480181
Condition 3: 24 Hour
Replicate 17.7659742967789
Replicate 25.2279132185072
Replicate 37.5120764234043


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_319776.p1 GENE.R_Transcript_319776~~R_Transcript_319776.p1 ORF type:complete len:405 (+),score=67.46,RVT_1|PF00078.23|2.5e-16,zf-RVT|PF13966.2|6e+02,zf-RVT|PF13966.2|4e-13 R_Transcript_319776:2499-3713(+)
ATGACTTGTATTACCTCAGTTACTTATGTACTCACTATTAATGGTGAATTACAAGAAGCTTTTGGAGCAAAGAGAGTCCTGAGACAGGGTGATCCACTATCTCCTGCCCTATTTGTTATAGCTATGGAGTACCTGACAAGATGTATGAGTGAGCTGCATGATAAGAAGAAGTTCAAGTTTCATCCTAAGAGCAAGAAGGTCTCTCTTACCCACCTTTGTTTTGCTGATGACCTCATGCTATTTTCTAGAGGTGATGTTCTTTTTGCCACACACATTTATGATGCCTTTAATAAGTTTTCAAATGTTTCTGGGTTACATGCCAATATGGGGAAGAGCTGTATATATTTTGGAGGGGTGCATGAAAGTGTGCAGAAAACTATAGTTGACCAGTTAGGCTATCAAATTGGTGATATGCCTGTGAGATATCTTGGGGTTCCTTTGTCTAACAAGAAGATAACAGTGCCCCAATGTCATTCCCTTATTGAGAAAATTACTGCCAGAATTAGAACCTGGGCTGCCAAGCTTTTATCTTATGCTGGTAGAGTCCAGCTTATTAAGTCTGTCCTGTTGGGTATACAGGCATACTGGGCACAGGTGATGATGCTGCCCAGGAAGATCATCAGAGAAATTGAAAGCATTTGTCTGATATTCCTCTGGTCTGGTTCTGATAAGGAGAAAATTCATGCAAAAGTGGCTTGGAAAACAGTTTGTACTCCTAAAATTGCTGGAGGATTAAATCTCATGAACCTTTCAAATTGGAATAGAGCAACTCTATTTAAACTCTTCTGGGCTATTGATCTGAAGAAAGATGCTCTCTGGATTAAATGGGTGCATAGCTATATTATCAAAAGGGGGGATGTTATGAATATCAGCCTTCCTGATTCTTTATCCTGGATGCTCAAAACAATTTTACTGAGCAGAGAAATTTGTGGTAGAGGTCAGTTATGCACTAGAACTTCAGGGGTTACTATTAAAGATATATATAAAGTTCTTCAAGGGGACTTTGTGAAAGTTAGCTGGAGGTCATTGGTGTGCCATAACCCTTCCAGACCAAAGGCTATTTTTTCTTTGTGGTTACTTCTGCAACAAAGACTTTCAACAAAGGATAGAATTACAAAATGGAGGGTCCATTGTGACTTGCAGTGTGATTTGTGTGGAGATTATGATGAATCTCATGAGCATTTGCTATTTGGTTGTAAATTCACAAAAGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_319776.p1 GENE.R_Transcript_319776~~R_Transcript_319776.p1 ORF type:complete len:405 (+),score=67.46,RVT_1|PF00078.23|2.5e-16,zf-RVT|PF13966.2|6e+02,zf-RVT|PF13966.2|4e-13 R_Transcript_319776:2499-3713(+)
MTCITSVTYVLTINGELQEAFGAKRVLRQGDPLSPALFVIAMEYLTRCMSELHDKKKFKFHPKSKKVSLTHLCFADDLMLFSRGDVLFATHIYDAFNKFSNVSGLHANMGKSCIYFGGVHESVQKTIVDQLGYQIGDMPVRYLGVPLSNKKITVPQCHSLIEKITARIRTWAAKLLSYAGRVQLIKSVLLGIQAYWAQVMMLPRKIIREIESICLIFLWSGSDKEKIHAKVAWKTVCTPKIAGGLNLMNLSNWNRATLFKLFWAIDLKKDALWIKWVHSYIIKRGDVMNISLPDSLSWMLKTILLSREICGRGQLCTRTSGVTIKDIYKVLQGDFVKVSWRSLVCHNPSRPKAIFSLWLLLQQRLSTKDRITKWRVHCDLQCDLCGDYDESHEHLLFGCKFTKD*

Click here to download the sequence:
Link to NCBI Protein BLAST