Transcript Information: R_Transcript_319831.p1


Annotated TAIR IDAT4G00980.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:422732-424580 | Reverse length=488
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.028032443813482
Replicate 30
Condition 2: 8 Hour
Replicate 10.13076563389717
Replicate 20.029854314874747
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.02922256967543


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_319831.p1 GENE.R_Transcript_319831~~R_Transcript_319831.p1 ORF type:3prime_partial len:749 (-),score=64.89,rve|PF00665.22|1.2e-16,UBN2_2|PF14227.2|1e-12,gag_pre-integrs|PF13976.2|1.1e+04,gag_pre-integrs|PF13976.2|2.5e-11,UBN2|PF14223.2|5.4e-08 R_Transcript_319831:3-2246(-)
ATGCATTTCCTCTTGATTTCTCTCAAAACTTATGCTCTAAGCGCCCCTATGCCAGAAAAGATAGAGGATGAAACTTTGGACATTGAAGGGCACATATTTTCTGGTATGTTAAATGATTTGATTGACATTTATCAAAATATTGAATCTGCTAAAAAGTTATGGGACTCTCTTGAGCCTAAGTACCTTGAAGAGGTTTTTAATAAATATAAAATGGTTGATTCAAGGCCCATTATGGAGCAATTCCATGAGATACAACGTATCTTGGGGCACTTCAAACAACACAATCTACATATGAGTGAATCTTTTCCTGTCTCTTCTATTATTACCAAATTACCACCATCATGGAAAGACTTTAAACGCCAATTGAAACATAAAAAGAAAGATTTGACCATTGAACAACTAAGAGGCCATATTCGGATTGAAGATGGCGTACTTGCACAAAAATGTGCATCTAAGGAGACTATTGCTCTTGGTTCTTCTACCATTAATATGGAGGAGGATGGAAAAACTAGTTGTGGGTCAAAGGGTAAGAAAAGATCCAACAAGAATTCTTTTAAGAATTCCAATAATAAAAAATACAATGGACTATGTTGGGAATGCAACAAACCCGGTCATTTCAAGAAAGATTGTTGGGTTTGGAAGAAGAAAAAGACTCAACGTCAAGGCCAAGGTCAACATGGCCAAGGCGAAAAGTACCAAGGTACAATTGCACATGTTGCTACAAATTCCGAAATGAATTTTGTGGATGTGATTACTGAAATCAATTGTGTGCAGGATGAGGATCATTCTTGGTGGATTGATTCAGGAGCCTCTAGACATGTGTGTAAAGATCGTAGCATCTTCAAGACCTTTGAACCGGTTGAAGATGGACAAGTTCTTTACATGGGGAACCAGTCTATTGCCCATATTCATGGCAAAGGACAAGTAGAATTACTTTTTACATCCGGAAAGTTGTTAACTTTAAGGGATGTATTGTTTGTTCCCGATATTAGAAAGAATTTAGTGTCTGTAAGCATCTTGAATAGATTTGGTTTCAAGATGGTGTTTGAAGCTGATAAGTTTATTTTATCTAAGGGTGGTGTATTTGTGGGACAAGGTTATCTTTGTAATAGCATGTTTAAACTAAGTATTAATAAAGTTTCTAGTTCTATTTACATGGCTAGTGTAAATGATTCTTTTCTATGGCATTCTCGTCTTGGACATGTAAATTATAGGCGTCTATATGACATGTCTAAGATGGGAATAATTCCTCCTTTTGATATGAATATAGAAAAGTGTAAAACATGCATGGTTACAAAGATTACTCGATTGCCATTTCCTAGTGTGGAAAGAAGTACTTTGTTACTTGATTTGGTGCATAGTGATTTGTGTGACTTTCATAGCACACCTTCTTTAGGAAACAAGAAATATGTTGTAACTTTAATTGATAATAGCACTCGTTTTTGCTATGTATATCTCTTGTTTTCGAAAGATGAAGCCCTTGATAAGTTTAAGGTTTATAAAACCGAAGTTGAATTACAACAAAGTGCAATGATTAAAAAATTACGCACGGATAGAGGTGGTGAGTATTATGATCCCAAATATTTTGAATCCATTGGTATAATACATGAAATCACCGCTCCATATACACCACAATCAAATGGTGTAGCGGAAAGAAAAAATAGGGTCTTAAAAGAAATGGTTAATTCCATGCTTTCTAACTCGGGTCTAAGTGAAGGATTTTGGGGTGAAGCCATTCTAACGGCTTGTTATTTATTGAATAGAGTTCCTAATAAAAGGAACAAGACCACTCCATATGAACTTTGGTACAAAAGGAAACCAAACTTGAATTATATTCGAGTTTGGGGTTGTAGAGCAATTGTTAGATTACCGGAACCCAAAAGGAAAACTTTGGGTGAAAGAGGAATTGAGTGCATCTTTATTGGGTATGCAGTACATAGCAAAGTATACAGGTTCTATGTGATTGAACCAAATGATTCAATATCAATTCATACGATAATTGAATCAAGAGATGCAATATTTGATGAGACACGTTTCTCGGCAATTCCCCAGAACCTAGTTCCTGATTCGATAATCGGGTTCCTAGTACCAAGAGCCTGGTTCCCAATACTAGTGATAGTACGAAACCAGATCAAGCTGAGGATCATATTCCAGAACTTAGAAGAAGTAAGCGGGCTAGAAAGGAAAAGTCATTTGGTCCTGATTTCCAGATTTATTTGGTTGAAGGATCAAGGGAAGAGGTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_319831.p1 GENE.R_Transcript_319831~~R_Transcript_319831.p1 ORF type:3prime_partial len:749 (-),score=64.89,rve|PF00665.22|1.2e-16,UBN2_2|PF14227.2|1e-12,gag_pre-integrs|PF13976.2|1.1e+04,gag_pre-integrs|PF13976.2|2.5e-11,UBN2|PF14223.2|5.4e-08 R_Transcript_319831:3-2246(-)
MHFLLISLKTYALSAPMPEKIEDETLDIEGHIFSGMLNDLIDIYQNIESAKKLWDSLEPKYLEEVFNKYKMVDSRPIMEQFHEIQRILGHFKQHNLHMSESFPVSSIITKLPPSWKDFKRQLKHKKKDLTIEQLRGHIRIEDGVLAQKCASKETIALGSSTINMEEDGKTSCGSKGKKRSNKNSFKNSNNKKYNGLCWECNKPGHFKKDCWVWKKKKTQRQGQGQHGQGEKYQGTIAHVATNSEMNFVDVITEINCVQDEDHSWWIDSGASRHVCKDRSIFKTFEPVEDGQVLYMGNQSIAHIHGKGQVELLFTSGKLLTLRDVLFVPDIRKNLVSVSILNRFGFKMVFEADKFILSKGGVFVGQGYLCNSMFKLSINKVSSSIYMASVNDSFLWHSRLGHVNYRRLYDMSKMGIIPPFDMNIEKCKTCMVTKITRLPFPSVERSTLLLDLVHSDLCDFHSTPSLGNKKYVVTLIDNSTRFCYVYLLFSKDEALDKFKVYKTEVELQQSAMIKKLRTDRGGEYYDPKYFESIGIIHEITAPYTPQSNGVAERKNRVLKEMVNSMLSNSGLSEGFWGEAILTACYLLNRVPNKRNKTTPYELWYKRKPNLNYIRVWGCRAIVRLPEPKRKTLGERGIECIFIGYAVHSKVYRFYVIEPNDSISIHTIIESRDAIFDETRFSAIPQNLVPDSIIGFLVPRAWFPILVIVRNQIKLRIIFQNLEEVSGLERKSHLVLISRFIWLKDQGKRF

Click here to download the sequence:
Link to NCBI Protein BLAST