Transcript Information: R_Transcript_31998.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value3E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1118554896275
Replicate 21.1723822567476
Replicate 31.6278899814525
Condition 2: 8 Hour
Replicate 11.9265528257985
Replicate 21.4188376802783
Replicate 31.5203125646517
Condition 3: 24 Hour
Replicate 11.3401765640538
Replicate 21.0076006599756
Replicate 30.9999458994014


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31998.p1 GENE.R_Transcript_31998~~R_Transcript_31998.p1 ORF type:complete len:394 (+),score=40.84,zf-RVT|PF13966.2|1.7e-19,zf-RVT|PF13966.2|1.6e+04 R_Transcript_31998:515-1696(+)
ATGAAATATTGCAGGGGACGTTGCGATGTGGACATGTTTGAGCCAAGAACTAATGCGTCTAATACTTGGAAAGGGATTCTTGCGAATGCCTCGAACCTAAGGGCAGGGGTGCGAACCGCTGTAGGAAATGGCAAAGGTACCTTATTCTGGTACCATAATTGGATGATGTCTACACCTTTGACACATTATGTGACCCAAGATATACCTGAACCAATTCAAGACTTGACGGTGGATGAGATGTGGGATCCTGCTGTGGGCTGGAAATGGGACAAATTTGCTGAGATTTTACCTGCAGATATTCTCAAAATGTTCGAGGCAGTTGAGCTTTCACCAGACGCTGAGCATGCTGATACTCTGTTTTGGGATGGTTCCCCGTCAGGGGGTTTCACTTTGAAATCAACCTTGTCTATAATTCGAAAAGAGACCAACATGAACGGAGACCGAGTCTGGGATCTTATTTGGAGGATACATGTGCAGCAGCGGGTCCGAATGTTTCTCTGGTTGGTCCTGCATGACCGAGTTCTTTCAAATGCTCAACGTGTCAGGAGGGGGCTGAGCCAAGACCCTAGCTGCTCACTGTGTCATGCGTCGGAAGAGGATGTGGATCATATTATTCGCAACTGCCAAGCTGCAAGGTATGTTTGGGGGGGTTTAGGCATCCCAAATAATGAGCCTAGCTTCTTCACAATGCCATTGAAGGAGTGGATACTTGACAACATTGCAAACAAATCCTGGATTAAGGAAGATAAATGGCCTCAATTTTTTGCGATCACTATTTGGTGGTTGTGGAAATGGCGAAATGCTAGAATCTTCGAGAGAGGGGCCGACATACCTGTTGACCCAATCCGCTTTCTTCATATACGATGGCAAGAACTACAACATGCGTGGCATAGGGGCCCTGACTTAGTGAGCCACATTGGAGTACACCGCGAAGAGAGGCTTGTCTACTGGAGCCCCCCGAATGAGGGGTGGTTTATGCTTAATACTGATGGTGCGGCGCGGGGGAACCCGGGGTTGGCAGGTGGTGGCGGCATTCTAAGGGACTGGACTGGGAGGTTTGTCAAAGCATACTCGGCACGGTTTGGTATCTGTACTTCGTTCAGAGCCGAATTGTTGGCAGTTCATAAAGGGCTCATGCTTGCTTGGGGGGGAAGGAATCCGGCAGCTCCGAGTTTGTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31998.p1 GENE.R_Transcript_31998~~R_Transcript_31998.p1 ORF type:complete len:394 (+),score=40.84,zf-RVT|PF13966.2|1.7e-19,zf-RVT|PF13966.2|1.6e+04 R_Transcript_31998:515-1696(+)
MKYCRGRCDVDMFEPRTNASNTWKGILANASNLRAGVRTAVGNGKGTLFWYHNWMMSTPLTHYVTQDIPEPIQDLTVDEMWDPAVGWKWDKFAEILPADILKMFEAVELSPDAEHADTLFWDGSPSGGFTLKSTLSIIRKETNMNGDRVWDLIWRIHVQQRVRMFLWLVLHDRVLSNAQRVRRGLSQDPSCSLCHASEEDVDHIIRNCQAARYVWGGLGIPNNEPSFFTMPLKEWILDNIANKSWIKEDKWPQFFAITIWWLWKWRNARIFERGADIPVDPIRFLHIRWQELQHAWHRGPDLVSHIGVHREERLVYWSPPNEGWFMLNTDGAARGNPGLAGGGGILRDWTGRFVKAYSARFGICTSFRAELLAVHKGLMLAWGGRNPAAPSLC*

Click here to download the sequence:
Link to NCBI Protein BLAST