Transcript Information: R_Transcript_32004.p1


Annotated TAIR IDAT2G21390.1
Annotated Gene NameCoatomer, alpha subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9152428-9156577 | Forward length=1218
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.036421199079
Replicate 220.582240260184
Replicate 327.217044013177
Condition 2: 8 Hour
Replicate 123.017115447534
Replicate 219.62318965192
Replicate 332.828015592006
Condition 3: 24 Hour
Replicate 137.690796089526
Replicate 235.502261435202
Replicate 333.613903089409


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_32004.p1 GENE.R_Transcript_32004~~R_Transcript_32004.p1 ORF type:complete len:1217 (+),score=290.33,COPI_C|PF06957.7|2.5e-165,Coatomer_WDAD|PF04053.10|2e-130,WD40|PF00400.28|84,WD40|PF00400.28|0.0068,WD40|PF00400.28|6e-06,WD40|PF00400.28|5.6e-06,WD40|PF00400.28|0.0047,WD40|PF00400.28|0.00038,WD40|PF00400.28|2.4e+03 R_Transcript_32004:435-4085(+)
ATGTTGACGAAATTCGAGACAAAGAGCAATAGAGTGAAAGGGTTGAGCTTTCACCCAAAGAGACCGTGGATCTTAGCGAGTTTACACAGCGGTGTCATCCAATTATGGGACTATCGTATGGGTACTCTCATCGATCGCTTCGACGAGCATGATGGCCCCGTTCGTGGCGTCGATTTCCATATTACTCAGCCTCTCTTCGTCTCTGGGGGGGACGATTACAAGATCAAAGTATGGAACTACAAACTGCATAGATGCCTTTTTACTCTTCTAGGACACCTTGATTATATCCGGACTGTCCAATTTCACCACGAATATCCTTGGATTGTCAGTGCTAGTGATGACCAGACCATAAGGATATGGAACTGGCAATCACGTACTTGTATCTCTGTGTTAACTGGACACAATCATTATGTCATGTGTGCCTCCTTTCATCCCAAGGAGGATTTGGTTGTTTCTGCATCATTGGACCAGACAGTTCGTGTTTGGGATATTGGTGCCTTGAGGAAGAAAACTGTTTCTCCTGCAGATGACCTCCTGCGGTTGAGTCAGATGAATACAGATCTATTTGGTGGTGTTGATGCTGTTGTTAAGTATGTCTTGGAGGGTCATGATCGGGGAGTCAACTGGGCCTCTTTCCATCCAACCCTTCCTTTGATTGTGTCTGGAGCTGATGATCGCCAGGTGAAAATTTGGCGTATGAATGATACAAAAGCCTGGGAAGTGGACACCTTGAGAGGGCACATGAACAATGTTTCTTGTGTTCTCTTTCATGCTAGGCAGGATATCATTGTGTCTAACTCAGAGGACAAAAGTATTCGTGTGTGGGATGCCACAAAGCGGACTGGGCTGCAGACTTTCAGGAGGGAACATGACCGCTTCTGGATTCTTACAGCCCATCCTGAGATGAATCTTCTGGCTGCTGGTCACGATAGTGGAATGATTGTCTTTAAGTTGGAAAGAGAACGCCCTGCTTTTTCAGTTAGTGGCGATCTTGTGTACTATGTAAAAGATCGCTTTCTACGTGTTTATGAGTACTCGACTCAAAAGGATACTCAAGTCATCCCCATAAGAAGACCTGGTGCCAGCATCCTCAATCAAAGCCCAAGAACTCTTTCTTACAGCCCTACAGAAAATGCTATTTTGATTGCTTCAGATATAGATGGTGGGTCATATGAACTATATGTAGTGCCAAAAGATGGTTGGGGCAGGGGTGATATGCTACAAGATGCAAAGAGAGGCCTTGGTGGTTCAGCTGTTTTTATCGCTCGTAACAGATTTGCTGTATTGGAGCGTAGCAGCAACCAAGTCTTAGTGAAAAATCTTAAAAATGAGATTGTGAAAAAGGTGGCCCTTCCTGTTCTAACTGATGCCATATTTTACGCCGGAACAGGAAATCTTCTCTGCAGAGCAGAGGATAGAGTGGCTGTATTTGATCTTCAGCAGAGAATGGTTCTTGGAGAACTCCAAACTTCTTTTGTCAGATACGTGGTCTGGTCAAATGATATGGATAGTGTTGCTCTGTTGAGCAAACATTCAATTATCATAGCCACAAAGAAGCTCGAGCACCGGTGCACTCTTCATGAAACCATCCGTGTGAAGAGTGGAGCCTGGGACGACAATGGTGTTTTCATCTATACAACTCTGAATCACATGAAATATTGTCTTCCTAATGGGGACAGTGGAATAATTAGGACTCTTGATGTCCCATTGTACATCACAAAGGTGGCTGGGAACACCATATTTTGCTTAGATCGGGATGGGAAGAATCGGGTTATATCTATAGATGCTACTGAATACATGTTCAAGCTCTTCCTCCTCAGAAAGAGATTTGACCAGGTCATGAACATGATTAGGCGCTCAGAGCTTTGTGGGCAGGCCATGATTGCCTATCTTCAGCAAAAAGGTTTTCCAGATGTTGCTCTTCACTTTGTGAAAGATGAGAAGACTCGCTTTAACTTGGCTTTGGAGAGTGGTAATATTGAAGTAGCTGTTGCTTCTGCCAATGTAATTGATGACAAAAACCACTGGTATAGGTTGGGGGTGGAGGCCCTTCGTCAAGGCAATGCAGACATTGTGGAGTATGCATATCAGAAGACCAAGAACTTTGAGAGGTTGTCATTCCTTTATCTCATAACTGGAAATATGGAGAAATTGTATAAGATGCTGAAAATCGCCGAAGTTAAGAATAATGTCATGGGTCAGTTTCACAATGCTCTTTACCTGGGTGATATCCAGGAACGTGTTAAGATTCTGAGAGCCGCAGGTCATTTGCCTCTTGCTTACGTCACTGCTAAAGTCCATGGGCTTCAGGATGTTGCTGCGGAGCTAGCTGCTGAGCTGGGGGATGACATTCCTGAATTGCCTAAAGGAAAATCATCGTCCCTCTTTATGCCTCCAAATCCTATAATATGTGGTGCGAATTGGCCATTGCTGACAGTCATGAAGGGCATATTTGATGGTGGTCTTGATTATGCTAGGGATGCACAGGATGAGGAGGAAGAAGTTGCAGATGCTGACTGGGGTGAGGCCTTGGATATTGTTGATGTGGACATGCCAAATGGAGATATCACTGCTGTTTTGGATGAAGAGGAAGGACCACTTGAAGATGGTGAGGAAGGAGGGTGGGATCTTGAGGATCTTGACCTTCCTCCGGAGGTTGAAACACCCAAGGTTTCCAGCAATGGGCATTCTTCTGTATTTGTTGCACCTACCCCTGGAATGGCTGTGAGTCAAATATGGATCCAGAGATCGTCCCTTGCTGCTGAACATGTTGCAGCTGGCAACTTTGACACTGCCATGCGCTTGCTTAACCGACAGTTGGGTATAAGAAACTTCACCCCTTTGAAGCAATTGTTTGTTGATCTACACTCTGGAAGCCACTCTTACCTGGCCGCCTTTGCTTCTGCACCTGTGCTTTCTGTGGCAATTGAGAGGGGATGGCATGAGTCAGCCAGCCCTAATGTGAGGGGTCCAGCGGCTCTTGTTTTCGGCTTTTCTCAGTTGGAGGAAAAGCTTAGGGCTGGTTACAAATTAACCACTGCTGGAAAATTGAGTGAGGCTCTTCGGACTTTCGTCAGTATACTTAATACCATTCCATTGATAGTCGTTGAATCAAGGAGAGAGGTTGATGAAGTCAAGGAATTGATCATCATAGTGAAGGAGTATGTTTTGGGTTTGAAGATGGAGTTGAAGAGAAGGGAGCTAAAAGACAATCCTGTTCGCCAGCAGGAATTGGCTGCATATTTCACTCACTGTAACCTTCAGCTGCCTCACGTGAGACTTGCATTGTTAACTGCAATGACTAATTGCTACAAGGCTGGTAACCTGAGTACAGCTGCTAACTTCGCCCGGCGTCTCTTGGAGACCAATCCCACCGTTGAGAACCAAGCCAAGACTGCTCGGCAGGTACTCCAGGCTGCTGAGAGGAACATGAAAGATTCAACGCAGCTCAACTATGACTTCAGGAACCCATTTGTGGTTTGTGGGGCAACTTACGTGCCTATATACCGGGGTCAGGAGGATGTATCATGTCCTTACTGTAGTTCACGCTTTGTTCCAGCCCAGGAAGGTCAAATTTGTGCTGTTTGTGATCTTGCTGTCATTGGGGCTGATGCATCTGGACTGCTTTGCTCCCCTTCACAGATAAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_32004.p1 GENE.R_Transcript_32004~~R_Transcript_32004.p1 ORF type:complete len:1217 (+),score=290.33,COPI_C|PF06957.7|2.5e-165,Coatomer_WDAD|PF04053.10|2e-130,WD40|PF00400.28|84,WD40|PF00400.28|0.0068,WD40|PF00400.28|6e-06,WD40|PF00400.28|5.6e-06,WD40|PF00400.28|0.0047,WD40|PF00400.28|0.00038,WD40|PF00400.28|2.4e+03 R_Transcript_32004:435-4085(+)
MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHITQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDLLRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWEVDTLRGHMNNVSCVLFHARQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILTAHPEMNLLAAGHDSGMIVFKLERERPAFSVSGDLVYYVKDRFLRVYEYSTQKDTQVIPIRRPGASILNQSPRTLSYSPTENAILIASDIDGGSYELYVVPKDGWGRGDMLQDAKRGLGGSAVFIARNRFAVLERSSNQVLVKNLKNEIVKKVALPVLTDAIFYAGTGNLLCRAEDRVAVFDLQQRMVLGELQTSFVRYVVWSNDMDSVALLSKHSIIIATKKLEHRCTLHETIRVKSGAWDDNGVFIYTTLNHMKYCLPNGDSGIIRTLDVPLYITKVAGNTIFCLDRDGKNRVISIDATEYMFKLFLLRKRFDQVMNMIRRSELCGQAMIAYLQQKGFPDVALHFVKDEKTRFNLALESGNIEVAVASANVIDDKNHWYRLGVEALRQGNADIVEYAYQKTKNFERLSFLYLITGNMEKLYKMLKIAEVKNNVMGQFHNALYLGDIQERVKILRAAGHLPLAYVTAKVHGLQDVAAELAAELGDDIPELPKGKSSSLFMPPNPIICGANWPLLTVMKGIFDGGLDYARDAQDEEEEVADADWGEALDIVDVDMPNGDITAVLDEEEGPLEDGEEGGWDLEDLDLPPEVETPKVSSNGHSSVFVAPTPGMAVSQIWIQRSSLAAEHVAAGNFDTAMRLLNRQLGIRNFTPLKQLFVDLHSGSHSYLAAFASAPVLSVAIERGWHESASPNVRGPAALVFGFSQLEEKLRAGYKLTTAGKLSEALRTFVSILNTIPLIVVESRREVDEVKELIIIVKEYVLGLKMELKRRELKDNPVRQQELAAYFTHCNLQLPHVRLALLTAMTNCYKAGNLSTAANFARRLLETNPTVENQAKTARQVLQAAERNMKDSTQLNYDFRNPFVVCGATYVPIYRGQEDVSCPYCSSRFVPAQEGQICAVCDLAVIGADASGLLCSPSQIR*

Click here to download the sequence:
Link to NCBI Protein BLAST