Transcript Information: R_Transcript_320284.p1


Annotated TAIR IDAT2G40316.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 138 Blast hits to 138 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 62; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16836355-16838688 | Forward length=276
E-Value2E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.76585850159659
Replicate 20
Replicate 30.80093488098435
Condition 2: 8 Hour
Replicate 11.5410684232532
Replicate 20.46910940925564
Replicate 30.76160604001624
Condition 3: 24 Hour
Replicate 11.6054410648744
Replicate 20.61693031861755
Replicate 30.91836523161807


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_320284.p1 GENE.R_Transcript_320284~~R_Transcript_320284.p1 ORF type:internal len:143 (-),score=12.71 R_Transcript_320284:2-427(-)
AGCGAAGATGGGTTTTATAAAGTTGCAAGAAATGATACTATTATCTGGTTTCAGCTTTGCGATGGGATGATATTCAACCATGATCCTCCTAGATGCGTTGATTGTTGGGATTGCGGTGGCCCATTGCGCTGCGGTATGGGTTGCAGTGCACTTGTGGCTAGGGACACTGGTGGCTACTATGTTTGCACAGCTATCGGCCGTGACTTGAACTTTGACATCAATCTAATGGATAAAAGGACTCCAGATTTGGGTGTCAATGTTACGATGTCAAGCAATAGCCACGGAGTCAACTGTTCACTTTCTATCTCTGTCGTATGCGACTTAAATGGTTTTAAGTCATTTGAAAAATTAGGGACCTGTAATTATCAGGCTACTGTGCTGAGGCATCCGTCTGGCTGCCCCAAGGTTGTATCAGTTCATGGGAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_320284.p1 GENE.R_Transcript_320284~~R_Transcript_320284.p1 ORF type:internal len:143 (-),score=12.71 R_Transcript_320284:2-427(-)
SEDGFYKVARNDTIIWFQLCDGMIFNHDPPRCVDCWDCGGPLRCGMGCSALVARDTGGYYVCTAIGRDLNFDINLMDKRTPDLGVNVTMSSNSHGVNCSLSISVVCDLNGFKSFEKLGTCNYQATVLRHPSGCPKVVSVHGK

Click here to download the sequence:
Link to NCBI Protein BLAST