Transcript Information: R_Transcript_320327.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value8E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23860079679371
Replicate 20.068615360837575
Replicate 30.14971723919054
Condition 2: 8 Hour
Replicate 10
Replicate 20.073074777258776
Replicate 30.059318988955513
Condition 3: 24 Hour
Replicate 10.075025513816027
Replicate 20.072076009446331
Replicate 30.35764223344604


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_320327.p1 GENE.R_Transcript_320327~~R_Transcript_320327.p1 ORF type:5prime_partial len:306 (+),score=38.04,zf-RVT|PF13966.2|7.7e+03,zf-RVT|PF13966.2|2.7e+03,zf-RVT|PF13966.2|4.9e-11 R_Transcript_320327:2-919(+)
ATTTCTATAAGTATTGTTATGAGGTGCCTGGATAAGTTTGCAAAAGCTTCAGGATTGGAGGTCAATATGAGTAAATCTCAGATATACTTAGGTGGTGTATCTGATGCACTTAAAAGACAGATTTTGGTAAAAACAGGCTTTGTAGAGGGTACTTTTCCCATGAAGTATTTGGGTATGCCTCTTTCACCCAGTAAATGGAATAAAGCTGACTGTCAATTTCTTGTGGATAAAATTGTGAAAAGGGTCAACTCTTGGAGCAGCAGCAATTTATCTCTGGCAGGTAGGGCTCAACTAATTAATTCAGTGCTATACTCCCTGCATACTTATTGGGCTAGTATTTTTGTTATCCCATCTGGTGTAATCAAGCTCATTGAAAGAGCCTGTAGGAAGTTTCTTTGGGGGCAGCATCTTGATAATAATAAAATCCCTTTGTTAGCTTGGAACTTCGTCTGTCAAGCAAAGAGAACTGGTGGCGTAAGCATTAGAAACTGTAGAATATGGAATAGAGCAGCAATTGCAAAGCATTTATGGGCTGTTGCAGAGAAGAAAGACTGCTTGTGGGTTAAATGGGTAAATGGAGTGTATTTGAAAGTGGAAAGCATATATGATTATACCTGTCCAAATGATTGCAGCTGGTATTGGAAGAAACTTGTGAAGCTCACTGAGATTAGTTGTTTTCAAAGGGGACGATGGCCAGTGGATGTTATGGGATCCTACACCATTGCTCAGGGATATAAAGAACTGATTGGAACTCAGCCTAAGTATCAGTTGGCCACTGTTATCTGGCGGAAGCTTACAGTACCTAAGCATGCTATTTTCCTCTGGTTGATAGCTCACAGGAGGCTACTAACCCGTGACAGGTTAAAGCATTTGAAGATTCATATCTCTGATGATAGATGCCCTTTGTGTTTGAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_320327.p1 GENE.R_Transcript_320327~~R_Transcript_320327.p1 ORF type:5prime_partial len:306 (+),score=38.04,zf-RVT|PF13966.2|7.7e+03,zf-RVT|PF13966.2|2.7e+03,zf-RVT|PF13966.2|4.9e-11 R_Transcript_320327:2-919(+)
ISISIVMRCLDKFAKASGLEVNMSKSQIYLGGVSDALKRQILVKTGFVEGTFPMKYLGMPLSPSKWNKADCQFLVDKIVKRVNSWSSSNLSLAGRAQLINSVLYSLHTYWASIFVIPSGVIKLIERACRKFLWGQHLDNNKIPLLAWNFVCQAKRTGGVSIRNCRIWNRAAIAKHLWAVAEKKDCLWVKWVNGVYLKVESIYDYTCPNDCSWYWKKLVKLTEISCFQRGRWPVDVMGSYTIAQGYKELIGTQPKYQLATVIWRKLTVPKHAIFLWLIAHRRLLTRDRLKHLKIHISDDRCPLCLS*

Click here to download the sequence:
Link to NCBI Protein BLAST