Transcript Information: R_Transcript_321550.p1


Annotated TAIR IDAT3G25060.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9128516-9130321 | Forward length=601
E-Value1.3E-195
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.5804828572172
Replicate 20.14838374852507
Replicate 30.36424141053953
Condition 2: 8 Hour
Replicate 10.17304498195933
Replicate 20.23704115025992
Replicate 30.38483980113895
Condition 3: 24 Hour
Replicate 10.93291442798091
Replicate 20.50656955049029
Replicate 30.88942969575731


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_321550.p1 GENE.R_Transcript_321550~~R_Transcript_321550.p1 ORF type:complete len:566 (+),score=106.90,PPR|PF01535.16|1.2,PPR|PF01535.16|4.3e-05,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.012,PPR|PF01535.16|5.3e-06,PPR|PF01535.16|25,PPR|PF01535.16|9e-05,PPR|PF01535.16|7.5e-06,PPR|PF01535.16|3.9e+03,PPR|PF01535.16|0.054,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|0.0029,PPR|PF01535.16|0.016,PPR|PF01535.16|1.8e+03,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|2.3e-09,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|7e-05,PPR_2|PF13041.2|3.2e-05,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|0.6,PPR_2|PF13041.2|4.8e-11,PPR_2|PF13041.2|0.0052,PPR_2|PF13041.2|0.21,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|5.8e+02,PPR_3|PF13812.2|0.36,PPR_3|PF13812.2|62,PPR_3|PF13812.2|0.0034,PPR_3|PF13812.2|30,PPR_3|PF13812.2|6e+03,PPR_3|PF13812.2|15,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.16,PPR_1|PF12854.3|0.82,PPR_1|PF12854.3|6.4e+02,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|25,PPR_1|PF12854.3|0.74,PPR_1|PF12854.3|6.9e-06,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|17,PPR_1|PF12854.3|9.1,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|11 R_Transcript_321550:137-1834(+)
ATGTGGTCATCTATATGGCCAAAACACCTGAGATCTTTACTATTATTACCCCCCAAAAACGACATACCCACAATTTCAAAAATCCATGCCCTCCTTATAAAAACCGATTTACTCAACCAAGCAAATTATAACACAAAGCTCATAGCATCTTATGCTAGTGCAGGTGATATTGCAGCAGCACACCAAGTGTTCGACAAATTGCCTCACAGAGGGGTGAGTGCTTGGAATGCAATGATGGTTGCTTATTCACAACTGGGCATGCTTAATGATGTTATCAATCTCTACAACAAGATGGTTTATGAAGGGATAAGACCAGATAGTTCGTCTTTCACTGTTTCTATTAAGGCCTGCACCAGTTTGTCTGATTTTGAAACAGGCGCAGAAATATGGCGTCAGGCGGTTCATTGTGGGTACCAAAACGATGTCTTTGTTGGGGCTTCGGTGTTGAATTTGTTTTCTAGAGGTGGGAAAATGGAGGAAGCGAAAGTGATTTTTGATGGAATGCAGAGAAAAGATTTAATTTGTTGGACAACAATGATAACTGGGTTCGCAAAGAGTGGACAGGGGATTGGAGCCGTTGAGTTTTATAGGCGGATGCAAGATCAGGGGATGAGTGGAGATGGGGTTGTTATGTTGGGATTAATTCAGGCTTGTACTGATCTTGGGGATGATAAAATGGGTCTTTCTATTCATGGGCATATGATAAGAAGAAATGTTCCTTTTGATGTTGTTATCTACACTAGCCTTGTTGACATGTATGCAAAAAATGGCCAATTGAATCTTGCATATCGAGTTTTCAGTAATATGCCTCAGAAAAATACGGTTTCCTGCAGTGCACTGATATCTGGTTATGCTCAAAATGGTTTTGCAAGCGAATCTCTTGAGTTGTTGATAGAGATGCAGAGGGTTGGATACACACCGGATTTAGCTTCTCTTGTGAGTGCTCTTTTGGCATGTTCACATGTTGGGTATATGAAAAAGGGGAAATCGATACATGTATACCTTCTTCGTAGGCAAGAGATTGAAGCTGTTTCAGCGACTGCATTAATTGACATGTATTCTAAATGTGGGGCTCTTTCAAATGCTCGTGTCCTCTTTGATCAGATACGTTGTAAGGATGTTATCTTATGGAATGCGATGATAGCTAGCTACGGGATTCATGGACATGGAAGGGCAGCCCTTTCGGTTTTCCTTGAGATGATCGAGAAAGGCTCAAAACCTGATGATGTAACTTTTGCTTCACTTCTTTCAGCCTTGGGACACTCAGGCCTTGTAGAAGAAGGCCAGTACTGGTTCGATGAAATGATCAACAGATTCAAGATTGAACCAAGAGAGAAACATTATGCTGCTGTTGTTGATTTATTGGCTCGTGCAGGAAAATCCAGAGAAGCTCTCAATTTAATAGAATCGATGAAAGAAGATGAACCCGGGCTTCCTATCTGGGTTGCCCTTTTGTCTGGTTGTCACAACCATGGAAATTTTGCCATTGGTGAGTTGGCTGCAAGGAAGGTTCTTAAATTAGAGCCAGATGATTCTGGTATATTTTCTTTAGTTGCAATTTTTTTTTGCCGCTGCAAGGCAGTGGGATTCAGTTGCTCGAGTGAGGAAAGCCATGAGGAAGGCTGGCATGAAGAAAGTACCCGGCTACAGCATGGTGGAGGTGAAAGGAAAGCTTCATGCTTTTCTTATGGAGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_321550.p1 GENE.R_Transcript_321550~~R_Transcript_321550.p1 ORF type:complete len:566 (+),score=106.90,PPR|PF01535.16|1.2,PPR|PF01535.16|4.3e-05,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|0.012,PPR|PF01535.16|5.3e-06,PPR|PF01535.16|25,PPR|PF01535.16|9e-05,PPR|PF01535.16|7.5e-06,PPR|PF01535.16|3.9e+03,PPR|PF01535.16|0.054,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|0.0029,PPR|PF01535.16|0.016,PPR|PF01535.16|1.8e+03,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|2.3e-09,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|7e-05,PPR_2|PF13041.2|3.2e-05,PPR_2|PF13041.2|1.1e-05,PPR_2|PF13041.2|0.6,PPR_2|PF13041.2|4.8e-11,PPR_2|PF13041.2|0.0052,PPR_2|PF13041.2|0.21,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.025,PPR_3|PF13812.2|5.8e+02,PPR_3|PF13812.2|0.36,PPR_3|PF13812.2|62,PPR_3|PF13812.2|0.0034,PPR_3|PF13812.2|30,PPR_3|PF13812.2|6e+03,PPR_3|PF13812.2|15,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.16,PPR_1|PF12854.3|0.82,PPR_1|PF12854.3|6.4e+02,PPR_1|PF12854.3|4.6e+03,PPR_1|PF12854.3|25,PPR_1|PF12854.3|0.74,PPR_1|PF12854.3|6.9e-06,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|17,PPR_1|PF12854.3|9.1,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|11 R_Transcript_321550:137-1834(+)
MWSSIWPKHLRSLLLLPPKNDIPTISKIHALLIKTDLLNQANYNTKLIASYASAGDIAAAHQVFDKLPHRGVSAWNAMMVAYSQLGMLNDVINLYNKMVYEGIRPDSSSFTVSIKACTSLSDFETGAEIWRQAVHCGYQNDVFVGASVLNLFSRGGKMEEAKVIFDGMQRKDLICWTTMITGFAKSGQGIGAVEFYRRMQDQGMSGDGVVMLGLIQACTDLGDDKMGLSIHGHMIRRNVPFDVVIYTSLVDMYAKNGQLNLAYRVFSNMPQKNTVSCSALISGYAQNGFASESLELLIEMQRVGYTPDLASLVSALLACSHVGYMKKGKSIHVYLLRRQEIEAVSATALIDMYSKCGALSNARVLFDQIRCKDVILWNAMIASYGIHGHGRAALSVFLEMIEKGSKPDDVTFASLLSALGHSGLVEEGQYWFDEMINRFKIEPREKHYAAVVDLLARAGKSREALNLIESMKEDEPGLPIWVALLSGCHNHGNFAIGELAARKVLKLEPDDSGIFSLVAIFFCRCKAVGFSCSSEESHEEGWHEESTRLQHGGGERKASCFSYGG*

Click here to download the sequence:
Link to NCBI Protein BLAST