Transcript Information: R_Transcript_321849.p1


Annotated TAIR IDAT5G58787.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23742733-23744324 | Forward length=242
E-Value1.1E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8308683485212
Replicate 22.592135853864
Replicate 32.1681274267963
Condition 2: 8 Hour
Replicate 114.107082685656
Replicate 216.655636268537
Replicate 312.175771733017
Condition 3: 24 Hour
Replicate 11.0392423024887
Replicate 21.815247645315
Replicate 31.8014571758763


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_321849.p1 GENE.R_Transcript_321849~~R_Transcript_321849.p1 ORF type:complete len:243 (+),score=42.13,zf-C3HC4_3|PF13920.2|4.6e-09,zf-RING_2|PF13639.2|1.1e-07,zf-C3HC4_2|PF13923.2|4.4e+03,zf-C3HC4_2|PF13923.2|1.6e-06,zf-RING_5|PF14634.2|1.8e-05 R_Transcript_321849:229-957(+)
ATGAGAAGGTCCTTTCGAGAATCTATTAAAGCTCTTGAAGCTGATATACAACACGCCAATACACTCGCTTCAGAGTATAGGAGGGAGCGTGACGGTGCTTGCTTCCAAATGAGGCTATCCTTCAGCCCAGCTGCTCAATTGTTTCTTTTCCTTGTTCAGTGGACTGATTGTCACCTTGCTGGTTCCCTTGGATTACTCAGAATTTTGGTTTTCATGACTTATGCAGATGGAAAGACTACTATGACTGTGTATGAAAAGAAAGCAAGCATTAAGCAATTTTATGGTGTGATATTCCCCTCTCTGCTGCAACTTGAAAGCGGAATTACAGAATTGGACGACAGGAAACAAAAAGAATTGTTCTTGTCGAGGTATAGAAGAAAAGACCAGTCCAAAAGGTGTGAATTCACGGAACTGGAGAAAGAGATGGAGGAGGAGTGTGGTATTTGCATGGAGGTCAGCAACAAGGTTGTCCTGCCTAATTGCAGCCATTCCCTGTGCTTGAAGTGTTACCAGGACTGGTCTGCCCGGTCTCAGTCATGCCCTTTCTGTCGAGATAGTCTCAACCAAGTCAAGCCTGATGATGTTTGGGTTTTCACTGATGATCGTGACATTGTTGATTTGTCCATTATAAAGAAGGAGAATGTAAACAGGCTATTTATCTACTTAGATAATTTGCCACAAATGGATCCATATTCTGAGTCCATATCATATGGTTGGCAAATCAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_321849.p1 GENE.R_Transcript_321849~~R_Transcript_321849.p1 ORF type:complete len:243 (+),score=42.13,zf-C3HC4_3|PF13920.2|4.6e-09,zf-RING_2|PF13639.2|1.1e-07,zf-C3HC4_2|PF13923.2|4.4e+03,zf-C3HC4_2|PF13923.2|1.6e-06,zf-RING_5|PF14634.2|1.8e-05 R_Transcript_321849:229-957(+)
MRRSFRESIKALEADIQHANTLASEYRRERDGACFQMRLSFSPAAQLFLFLVQWTDCHLAGSLGLLRILVFMTYADGKTTMTVYEKKASIKQFYGVIFPSLLQLESGITELDDRKQKELFLSRYRRKDQSKRCEFTELEKEMEEECGICMEVSNKVVLPNCSHSLCLKCYQDWSARSQSCPFCRDSLNQVKPDDVWVFTDDRDIVDLSIIKKENVNRLFIYLDNLPQMDPYSESISYGWQIS*

Click here to download the sequence:
Link to NCBI Protein BLAST