Transcript Information: R_Transcript_321928.p1


Annotated TAIR IDAT2G13770.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); Has 451 Blast hits to 352 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5736603-5737847 | Forward length=343
E-Value2E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1474071711434
Replicate 21.2350764950764
Replicate 31.5720310115007
Condition 2: 8 Hour
Replicate 11.9204599958624
Replicate 21.315345990658
Replicate 30.53387090059962
Condition 3: 24 Hour
Replicate 11.1253827072404
Replicate 21.513596198373
Replicate 30.85834136027048


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_321928.p1 GENE.R_Transcript_321928~~R_Transcript_321928.p1 ORF type:complete len:102 (+),score=14.74,Plant_tran|PF04827.10|1.9e-35 R_Transcript_321928:1467-1772(+)
ATGGGGTACTATCTTACCGATGGCATATATATGAGATGGGCATCGTTCATTCCGTCCGTTTTTGCTCTACAAATTGCAAAGCATGTACTATTTGCCCAGCACCAAGAGGGTGCAAGAAAAGATGTGGAGAGTGCTTTCGATATCCTACAAGCTCGTTTTGCATTTCTAAGACAACCATTTCTTGCATGGGATAAGGGAATCTTAGGGAAAATTATGAAAGCTTGTATTATCATGCACAACATGATAGTCGAGGATGAGTGGGATGCCAATCCTGAACACGGTGATGCAAATGAATTTGATGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_321928.p1 GENE.R_Transcript_321928~~R_Transcript_321928.p1 ORF type:complete len:102 (+),score=14.74,Plant_tran|PF04827.10|1.9e-35 R_Transcript_321928:1467-1772(+)
MGYYLTDGIYMRWASFIPSVFALQIAKHVLFAQHQEGARKDVESAFDILQARFAFLRQPFLAWDKGILGKIMKACIIMHNMIVEDEWDANPEHGDANEFDE*

Click here to download the sequence:
Link to NCBI Protein BLAST