Transcript Information: R_Transcript_321928.p2


Annotated TAIR IDAT2G13770.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); Has 451 Blast hits to 352 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5736603-5737847 | Forward length=343
E-Value7E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4519400759435
Replicate 20.23859432291248
Replicate 31.5618230179195
Condition 2: 8 Hour
Replicate 10.55649693061921
Replicate 20.25410093001347
Replicate 30.61880490751319
Condition 3: 24 Hour
Replicate 10.26088417304209
Replicate 20.25062794193838
Replicate 30.24872391689656


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_321928.p2 GENE.R_Transcript_321928~~R_Transcript_321928.p2 ORF type:complete len:88 (+),score=2.61 R_Transcript_321928:751-1014(+)
ATGTTACCCACAGTTGAGAGGTTGGTGCATCATAGAATTTATATACCCAGAGATCGTGAATATGCTCACTCTCGCTTAATCACTGATTACCTTGCCCCTAATACAAGGTATCGTGGTAAAAAAATTCATCGTAGATTTCGTATGCATGTGTTCCTTCATATCATGGAAGCTTTAATTGCAAATGATGTGTTTTTCCAACAACGTCCGGATGCTATTAGAAGAATAGGCTTATCCATGGAACAAAAATGCACTGTCACGATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_321928.p2 GENE.R_Transcript_321928~~R_Transcript_321928.p2 ORF type:complete len:88 (+),score=2.61 R_Transcript_321928:751-1014(+)
MLPTVERLVHHRIYIPRDREYAHSRLITDYLAPNTRYRGKKIHRRFRMHVFLHIMEALIANDVFFQQRPDAIRRIGLSMEQKCTVTI*

Click here to download the sequence:
Link to NCBI Protein BLAST