Transcript Information: R_Transcript_322057.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value6E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.15170357198923
Replicate 20.097159730795495
Replicate 30.19284321310042


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_322057.p1 GENE.R_Transcript_322057~~R_Transcript_322057.p1 ORF type:3prime_partial len:454 (+),score=14.48,rve|PF00665.22|5.4e-18,gag_pre-integrs|PF13976.2|8.2e-08 R_Transcript_322057:922-2280(+)
ATGTACTGTCTCAATGTCCCGGGTTCAAGAAGCTTCACCCCACTGTCACTGTGCCTTCCTTCAATCCACGGCCTACCCGAACCCATGCCCCCAATTACTATCCTCCTCAAGCCCATAGTGCACATGCCCAAACCTCTCATCTCCCAAAATCGTGGCTGCTTGACAGTGGCGCCAGTCATCACATCACGCATGACCTCAACACACTCTCTCTCCATGCACCTTATGACGGCTCGGATGAACTCATCATTGGTGATGGGTCTGCCCTCCCTATCACTCACATTGGAAATTCCGACGGGCCACCCACTCCTTCAAGGGACACCTAGTGGTGGAATCTATGATTGGAACTCGTCTTCTCCCAGTGTCTTCTCCAGCGTCACCACAAATTACCATGAATGGCATCATAAGTTGGGCCATCCATCACCACCTGTTATTAGTTATCTTAGGTCTCAATTTTCTCTTCCTATTTCTACTGTTTCTCCAAATAATTACTGTAATTCTTGCCTAATTAATAAAAGTCACAAGTTACCTTTTTCTACATCTACCATAAGCTCTTCTGCCCCTCTTGATATTATATTCACTGATGTATGGACTTCTCCCATCCACTCACATGACAACTACAAGTACTATGTAATTTTTGTTGATCATTTTACAAAGTATATGTGGTTCTACCCTCTCAAAAATAAATCTGACACAGCATCCACATTATTACGCTTCCGTGCTCAAGTTGAAAAATTTTTTAACAAACCTATACTTCGCCTATTCTCTGATAATGGCGGAGAATACATCAAACTACACTCCACTCTTCTTGAGAATGGCATATCACATCTCACATCTCCTCCCCACACCCCTGAACACAATGGCTATGCTGAACGCCGGCATCGTCATATTGTTGAAACGGGTCTCTCTCTCCTCACCCATGCCAAACTCCCACTTATCTTCTGGAGTCATGCATTTGCAACTGCTACATATCTCATAAATCGCCTACCAACACCCACCCTCTCGAACTCCTCTCCTTATCTCAAACTTTTTCACCAACCACCCAACTATGATAAACTACATAGCTTTGGTTGTCTTTGCTACCCATGGCTTCGTCCCTATACCTCACACAAACTTGACCCTAAATCTACTCCATGTATTTTTATAGGATACTCGGCATCTCAAAGTGCCTACTATTGTCTTGACCCCACAACGGAACGCATCTATGCATCTCGTCATGTTCGGTTTGTCGACAATGTGTTTCCTTATTCGTCTCTAGCCCCCCAAAATAAACCAACTTCTTCTTTCAATAGTGACACATGGTGCACTATTACTCTTCCCACAATACCCAATGTACCAGCAACTCCTACCACATCTTCCACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_322057.p1 GENE.R_Transcript_322057~~R_Transcript_322057.p1 ORF type:3prime_partial len:454 (+),score=14.48,rve|PF00665.22|5.4e-18,gag_pre-integrs|PF13976.2|8.2e-08 R_Transcript_322057:922-2280(+)
MYCLNVPGSRSFTPLSLCLPSIHGLPEPMPPITILLKPIVHMPKPLISQNRGCLTVAPVITSRMTSTHSLSMHLMTARMNSSLVMGLPSLSLTLEIPTGHPLLQGTPSGGIYDWNSSSPSVFSSVTTNYHEWHHKLGHPSPPVISYLRSQFSLPISTVSPNNYCNSCLINKSHKLPFSTSTISSSAPLDIIFTDVWTSPIHSHDNYKYYVIFVDHFTKYMWFYPLKNKSDTASTLLRFRAQVEKFFNKPILRLFSDNGGEYIKLHSTLLENGISHLTSPPHTPEHNGYAERRHRHIVETGLSLLTHAKLPLIFWSHAFATATYLINRLPTPTLSNSSPYLKLFHQPPNYDKLHSFGCLCYPWLRPYTSHKLDPKSTPCIFIGYSASQSAYYCLDPTTERIYASRHVRFVDNVFPYSSLAPQNKPTSSFNSDTWCTITLPTIPNVPATPTTSST

Click here to download the sequence:
Link to NCBI Protein BLAST