Transcript Information: R_Transcript_322517.p2


Annotated TAIR IDAT5G12440.1
Annotated Gene NameCCCH-type zinc fingerfamily protein with RNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4035891-4038604 | Reverse length=650
E-Value3E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3449550177161
Replicate 21.1050684429631
Replicate 30.96449421457484
Condition 2: 8 Hour
Replicate 11.8042216276917
Replicate 21.64764392514
Replicate 31.9106958547776
Condition 3: 24 Hour
Replicate 12.1749501584141
Replicate 20.23216061990081
Replicate 32.9951595887333


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_322517.p2 GENE.R_Transcript_322517~~R_Transcript_322517.p2 ORF type:5prime_partial len:95 (+),score=23.44 R_Transcript_322517:1-285(+)
GGGAACCCCCACTTTGTTTGTGATTCTCGCGTCCTCGTCAAGCCTTACAAGGAGAAGGGGAAACTTCCTGACAAGAAGCAGCAGCAGCAGCAACTGGGGAGGGGAGACTTCCCATGTTCTAGCCCTTCTGGACTTGATTCCAGAGAGCCATTTGAATTCCAACTTGGTATGTTGATAAAGCATGCATGGTATCTTGTTTGCGGTGAGAATGCCAGTGTTATTACTGATATACTTATGTCTATGCAGGTGGCAGAGTGTTTTACAGCACTCAAGAGATGCTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_322517.p2 GENE.R_Transcript_322517~~R_Transcript_322517.p2 ORF type:5prime_partial len:95 (+),score=23.44 R_Transcript_322517:1-285(+)
GNPHFVCDSRVLVKPYKEKGKLPDKKQQQQQLGRGDFPCSSPSGLDSREPFEFQLGMLIKHAWYLVCGENASVITDILMSMQVAECFTALKRCF*

Click here to download the sequence:
Link to NCBI Protein BLAST