Transcript Information: R_Transcript_322519.p1


Annotated TAIR IDAT5G12440.1
Annotated Gene NameCCCH-type zinc fingerfamily protein with RNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4035891-4038604 | Reverse length=650
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1817087902721
Replicate 20.77050643729534
Replicate 32.311689115208
Condition 2: 8 Hour
Replicate 12.6956915538252
Replicate 23.6926226893701
Replicate 32.8309851426292
Condition 3: 24 Hour
Replicate 13.7911975238411
Replicate 22.0234182468419
Replicate 32.2088509317052


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_322519.p1 GENE.R_Transcript_322519~~R_Transcript_322519.p1 ORF type:internal len:109 (-),score=35.07 R_Transcript_322519:3-326(-)
GACTTCTCATGTTCTAGCCCTTCTGGACTTGATTCCAGAGAGCCGTTTGAGTTCCAACTTGGTGGCAGAGTGTTTTACAGCACTCAAGAGATGCTTCTGAAAAAGAAACTGGAAGAGCAAGCTGATTTGCAGCAAGCCCTTGAGCTACAAGGTAGGAGGTTGATGAATTTGCAGCTCATGGATTCGAAGAATCAACACCACCACCAGCAGACTGTTGGATCTCCTGTGTTATCGCCAAATCTGCCTCAGGTTTCCTCGAATGTTAGTGCTCTGAGCCCATCTATTGGGTTGACTGAAGAAGTCTCAGAAGAAAGCAAAGAGACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_322519.p1 GENE.R_Transcript_322519~~R_Transcript_322519.p1 ORF type:internal len:109 (-),score=35.07 R_Transcript_322519:3-326(-)
DFSCSSPSGLDSREPFEFQLGGRVFYSTQEMLLKKKLEEQADLQQALELQGRRLMNLQLMDSKNQHHHQQTVGSPVLSPNLPQVSSNVSALSPSIGLTEEVSEESKET

Click here to download the sequence:
Link to NCBI Protein BLAST