Transcript Information: R_Transcript_322545.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3323329164028
Replicate 20.76628833636124
Replicate 32.1736320346714
Condition 2: 8 Hour
Replicate 10.5361868236623
Replicate 20.65287246251637
Replicate 30.79496104906804
Condition 3: 24 Hour
Replicate 11.0054514114323
Replicate 21.2878983293768
Replicate 32.0769354812384


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_322545.p1 GENE.R_Transcript_322545~~R_Transcript_322545.p1 ORF type:complete len:137 (+),score=23.48,zf-RVT|PF13966.2|6.4e-12 R_Transcript_322545:872-1282(+)
ATGCTGAAAGTGAGGGATGGCTTTACTGTTGTTGGTGCAAATATGGCTGTAGATATGTTGAACGAATGGGCTGAGGCTGGTAAAGTGTTTGCTAATGCTTATAAGAAGTTCAGAGGTGAGATGACAGTTAAAAGATGGGCTAAAGTTGTCTGGAATCAAGCAATTATGCCTAAATATTCAGTCATAGCTGTTATGGCTCTTTCAAATGGCTTGCCTACTCTAGACAACTTAGTGAAGCGAGGATTACACCTTGTTAACAGATGTGAACTGTGTTGCTGTCAGCAAGAGAACATTTACTCATTTGTACTTCAAATGTATATATGTTCAGGCAGTGTAGAGGACTGTATTAAATTGGATCCGAATCTACAGAAGAGTTTTAAGCCTCAAGAGAGAGATGAAATGGTTCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_322545.p1 GENE.R_Transcript_322545~~R_Transcript_322545.p1 ORF type:complete len:137 (+),score=23.48,zf-RVT|PF13966.2|6.4e-12 R_Transcript_322545:872-1282(+)
MLKVRDGFTVVGANMAVDMLNEWAEAGKVFANAYKKFRGEMTVKRWAKVVWNQAIMPKYSVIAVMALSNGLPTLDNLVKRGLHLVNRCELCCCQQENIYSFVLQMYICSGSVEDCIKLDPNLQKSFKPQERDEMVP*

Click here to download the sequence:
Link to NCBI Protein BLAST