Transcript Information: R_Transcript_3227.p1


Annotated TAIR IDAT1G12380.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62870.1); Has 173 Blast hits to 170 proteins in 34 species: Archae - 0; Bacteria - 4; Metazoa - 25; Fungi - 8; Plants - 123; Viruses - 7; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4214499-4216880 | Reverse length=793
E-Value1.8E-279
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.915033009388
Replicate 212.913217626925
Replicate 317.206939039363
Condition 2: 8 Hour
Replicate 113.478721432228
Replicate 214.802273894869
Replicate 322.306028544067
Condition 3: 24 Hour
Replicate 125.005686745668
Replicate 215.89428281551
Replicate 325.073239171845


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3227.p1 GENE.R_Transcript_3227~~R_Transcript_3227.p1 ORF type:complete len:852 (+),score=197.10,DUF659|PF04937.11|2.2e-06 R_Transcript_3227:534-3089(+)
ATGTCGGCGGCGGCGGGGGCGACGGGGGAAGGAGGAGGGACGGCGGAGGAGGCGACGGCGAAGGTGGTACATAAGAGATATGAAGGACTAGTGATGGTGAGAAATAAGGCGATAAAAGGAAAAGGGGCATGGTATTGGGCTCATCTTGAGCCTTTATTGGTTCATAACGCTGAAACTGGGTTGCCTAAAGCTGTGAAGCTTAAGTGTTGTTTGTGCGACACTATGTTTAGTGCTTCTAACCCTTCTCGTACTGCTTCTGAACATTTGAAGAGGGGTACTTGTCCTAATTTCAGCTCTCCTACTACTCCTAGACCTTTGTGCTCTCTTTCTCCACCGCCTCCACAACTTCCTACTACCACTAGTAGTCTTGGTGGTGGTGGCACTACTAACGCCAATAATACTGCTATGGTTGTTTCTGGTTCTGTGCCTTCCCCTGTTATGGTTGAGAGTCATTCACTCTCTACTACTACTTCGAGTACTCCACCACCACCACCTCCTCCTTCTGCATCTGGTCCTCCAGCCTCTCAGTCTCAGTCTCATCCGGCTCCTCAGTATAATCACCGCAAGAGGAGCTCGTCGGGCTCCTCTGGTGGTGGTCCTCCTCCTCGGACTACTGCTAATGCTGCTGCTGCGGCGGCCAACATCGTGCCCACCTCTTATGTCTCCCCTATCAGTGTGATAGACCCATCTCGCTACGCAACAGCCGAGATGGGTGGGTTCTCGCCTGGTGCAGGGGGCACGATGGTGGTCCACCACCACCACGTCCAGCAACAACAACATCAACACCACCAGCAATTGGCATTGCCTCCTCCCGGTGGTGGTGGGAGGGATGATTTATCGGATGCTAGAGGATTGTTCGAGGATAGCATCAAGAGGCTTAAGAGCCCGAAAGCGTCTCCTGGTCCTACTCTCACCAAGTCCCAAATTGAATGTGCTCTTGATTATCTAGGGGATTGGGTGTATGAGTCATGTGGGTCTGTGTCTTTTTCGGGTCTTGAGCATCCTAAGTTCAAGGCCTTTCTTCATCAAGTGGGCATGCCAGAGGTTTCTAAGAGGGAGTTTTCTGGGTCTAGGTTGGATGCTAGGTATGAGGATCTCAGGAATGAGTCTGAGGTTAGGATTAGAGATGCCCCCTTCTTTCAAATTGCTTCTGATGGGTGGAAACCAAGGGCTTATGAGGAGAATTTGGTGAATTTGACTGTGAATTTGCCTAATGGAACCAGTGTTTACAGGAGGGCTGTGTTTACTGGTGGCCAAGTCCCTTCTAAGTATGCAGAGGAGGTGTTGTTGGAGACAATTACAGACATTTGTGGCAATGCTGTGAATCAGTGTGTAGGGATTGTTGCTGACAAGTTCAACAACACAGCACTCAGGAATTTAGAGGCTCAGAATCTGTGGATGGTCAATCTATCATGTCAGTATCAGGCTTTCAATAGTTTGATTAAGGATTTCTACAGGGAGCTTCCCTTGTTTAAGAATGTTGCTGAAAACTGCCTCAAGCTTGCAAACTTTGTCAACAACAAGACCCAAGTGAGGAACAGCTTCCACAAGTTCCAATTGAGGGAGTATGGTCATGCAGGACTGCTTCGAGTGCCTATGAAAGAGCACGAAATCTTGAATTTCGAGCCTGTTTATGCCATGGTGGAAGACATAATGAGCTCTGCTCGAGTGCTCCAATTGGTACTGTTGGATGACTCATACAAGATAGCATCTATGGAGGACCCGATTGCCCGCGAATTTGGGGAGATGATTCGAGACATGGGGTTTTGGAATGACTTGGAAGCAGTCCGAACACTGGTGAGACTGGTGAAGGAAATGGCTCATGACTTTGAGATAGACAGGCCTCTAGTAGGCCAATGTCTCCCCTTATGGGAAGAGCTTAGATCTAAGGTGAAAGATTGGTGTGGCAAATTTCACATTTCTGAAGCCCTTGTTGAGAAAGTGATCGAGAGGCGGTTCAGGAAAAACTATCATCCTGCTTGGGCTGCTGCATACATTCTTGACCCGCTTTACTTGATCAGGGATAGCAGTGGCAAGTACCTCCCACCATTCAATTGCCTGGCACCAGACCAAGAGAAGGATGTTGACAAGTTGATTACTAGATTAGTAACAAGGGAAGAAGCACATATTGCATTGATGGAATTAATGAAGTGGAGAACAGAAGGGCTTGATCCAGTTTATGCACAAGCTGTACAGTTGAAGCAGAGAGACCCTTGTACTGGGAAGATGAAAATTGCAAATCCTCAAGGCAGTAGGCTTGTTTGGGAAACTTACCTTCCTGAGTTCAAGTCCCTAGGAAAGGTGGCAGTTAGGCTGATATTTCTTCATGCCACAGCTCGGGGGTTCAACTGCAATCCATCATTCTTGAAATGGGTACAATCTCATGGCCGGTCGAGGGCAGGAATGGATAGGGCTCACAAGATGATCTTCATTGCAGCTCATTCCAGGCTCGAAAGACGGGATTTCACTAGTGATGAAGATAAAGATGCAGAGCTATTTGCATCTCCCAACGGGTCCTCTGATTGTGATACCGTCGGACCAGGAAGGCCTCCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3227.p1 GENE.R_Transcript_3227~~R_Transcript_3227.p1 ORF type:complete len:852 (+),score=197.10,DUF659|PF04937.11|2.2e-06 R_Transcript_3227:534-3089(+)
MSAAAGATGEGGGTAEEATAKVVHKRYEGLVMVRNKAIKGKGAWYWAHLEPLLVHNAETGLPKAVKLKCCLCDTMFSASNPSRTASEHLKRGTCPNFSSPTTPRPLCSLSPPPPQLPTTTSSLGGGGTTNANNTAMVVSGSVPSPVMVESHSLSTTTSSTPPPPPPPSASGPPASQSQSHPAPQYNHRKRSSSGSSGGGPPPRTTANAAAAAANIVPTSYVSPISVIDPSRYATAEMGGFSPGAGGTMVVHHHHVQQQQHQHHQQLALPPPGGGGRDDLSDARGLFEDSIKRLKSPKASPGPTLTKSQIECALDYLGDWVYESCGSVSFSGLEHPKFKAFLHQVGMPEVSKREFSGSRLDARYEDLRNESEVRIRDAPFFQIASDGWKPRAYEENLVNLTVNLPNGTSVYRRAVFTGGQVPSKYAEEVLLETITDICGNAVNQCVGIVADKFNNTALRNLEAQNLWMVNLSCQYQAFNSLIKDFYRELPLFKNVAENCLKLANFVNNKTQVRNSFHKFQLREYGHAGLLRVPMKEHEILNFEPVYAMVEDIMSSARVLQLVLLDDSYKIASMEDPIAREFGEMIRDMGFWNDLEAVRTLVRLVKEMAHDFEIDRPLVGQCLPLWEELRSKVKDWCGKFHISEALVEKVIERRFRKNYHPAWAAAYILDPLYLIRDSSGKYLPPFNCLAPDQEKDVDKLITRLVTREEAHIALMELMKWRTEGLDPVYAQAVQLKQRDPCTGKMKIANPQGSRLVWETYLPEFKSLGKVAVRLIFLHATARGFNCNPSFLKWVQSHGRSRAGMDRAHKMIFIAAHSRLERRDFTSDEDKDAELFASPNGSSDCDTVGPGRPP*

Click here to download the sequence:
Link to NCBI Protein BLAST