Transcript Information: R_Transcript_32300.p1


Annotated TAIR IDAT1G20823.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7238880-7239473 | Forward length=197
E-Value4.2E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.423098611541
Replicate 210.029482788142
Replicate 312.885039897836
Condition 2: 8 Hour
Replicate 114.429170415341
Replicate 219.765422341762
Replicate 315.558523388903
Condition 3: 24 Hour
Replicate 114.246139306477
Replicate 211.126090422479
Replicate 312.995824657845


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_32300.p1 GENE.R_Transcript_32300~~R_Transcript_32300.p1 ORF type:5prime_partial len:224 (+),score=11.64,zf-RING_2|PF13639.2|2.4e-16,zf-RING_11|PF17123.1|5.1e-12,zf-rbx1|PF12678.3|8.4e-10,zf-C3HC4_2|PF13923.2|1.8e-07,zf-C3HC4_2|PF13923.2|1.4e+04,zf-C3HC4|PF00097.21|4.4e-07,zf-C3HC4|PF00097.21|1.2e+04,zf-ANAPC11|PF12861.3|1.5e-05,zf-RING_5|PF14634.2|2.7e-06,zf-RING_5|PF14634.2|1e+03 R_Transcript_32300:2-673(+)
AAATCTCTCCCCCTTTCTCTCTCTCCTCAATCCTTTAAACAACCCATCTCTCCCTCTCCCTCTCCCTCTCCCTCTCATACAACAGATTTTCCGACGATGACTTCTCGAGCTAGATTCCTGAAGAGTGTGACATCGCCGCCTTCAACAGGTGGCGAAGCAGACACAGTAGACTCAGATTTCGTGGTAATACTCGCGGCTCTACTCTGCGCTCTCATATGTGTTCTCGGCCTTGTCGCGGTGGCTCGTTGCGCTTGGCTCCGGAGATTCTCGTCATCGGCAGCGTCTCCTCCGGCGGCTGCTAACAAAGGCTTGAAGAAGAAGGTCCTAAAGTCGCTCCCAAAGGTGGCGTATTCAGTCGAACAGCACGCCGGCAAACTCCCGACCGACGAGTGCGCCATTTGCCTGTCGGAATTCGCTGCCGGTGAGGAGATACGTGTCCTACCTCAGTGTGGACACAGCTTCCACGTGTCCTGTATTGACACGTGGCTTGGCTCTCACTCTTCCTGTCCTTCTTGCCGTCAGATCCTGGCCGCCGTGGCCCCCACGCGCTGCCAGAAATGCGGTGGTGGTTTGCCCGAGAGTAGTGGTTGCTCTTCCTCTGTTGGAGCTGGACCTGTTGCTGACTCATCGTTGACGTCATCATCCAGGGTTAGGGATAGTTTCTTACCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_32300.p1 GENE.R_Transcript_32300~~R_Transcript_32300.p1 ORF type:5prime_partial len:224 (+),score=11.64,zf-RING_2|PF13639.2|2.4e-16,zf-RING_11|PF17123.1|5.1e-12,zf-rbx1|PF12678.3|8.4e-10,zf-C3HC4_2|PF13923.2|1.8e-07,zf-C3HC4_2|PF13923.2|1.4e+04,zf-C3HC4|PF00097.21|4.4e-07,zf-C3HC4|PF00097.21|1.2e+04,zf-ANAPC11|PF12861.3|1.5e-05,zf-RING_5|PF14634.2|2.7e-06,zf-RING_5|PF14634.2|1e+03 R_Transcript_32300:2-673(+)
KSLPLSLSPQSFKQPISPSPSPSPSHTTDFPTMTSRARFLKSVTSPPSTGGEADTVDSDFVVILAALLCALICVLGLVAVARCAWLRRFSSSAASPPAAANKGLKKKVLKSLPKVAYSVEQHAGKLPTDECAICLSEFAAGEEIRVLPQCGHSFHVSCIDTWLGSHSSCPSCRQILAAVAPTRCQKCGGGLPESSGCSSSVGAGPVADSSLTSSSRVRDSFLP*

Click here to download the sequence:
Link to NCBI Protein BLAST