Transcript Information: R_Transcript_32301.p1


Annotated TAIR IDAT1G76410.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)ATL8
Annotation TypeOrtholog
Chromosome Positionchr1:28668915-28669472 | Forward length=185
E-Value1.5E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7712729245287
Replicate 24.1645554544723
Replicate 35.8686683097581
Condition 2: 8 Hour
Replicate 14.3507941848411
Replicate 27.5768277313108
Replicate 36.9006123019653
Condition 3: 24 Hour
Replicate 16.7355550130867
Replicate 21.8227486686428
Replicate 34.2509178524139


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_32301.p1 GENE.R_Transcript_32301~~R_Transcript_32301.p1 ORF type:5prime_partial len:242 (+),score=5.17,zf-RING_2|PF13639.2|2.7e-16,zf-RING_11|PF17123.1|5.7e-12,zf-rbx1|PF12678.3|9.9e-10,zf-C3HC4_2|PF13923.2|2e-07,zf-C3HC4_2|PF13923.2|1.5e+04,zf-C3HC4|PF00097.21|5e-07,zf-C3HC4|PF00097.21|1.4e+04,zf-ANAPC11|PF12861.3|1.5e-05,zf-RING_5|PF14634.2|3.1e-06,zf-RING_5|PF14634.2|1.1e+03 R_Transcript_32301:2-727(+)
AAAAAAAATCAATTATCACTCCTCTTTCTTCCCCTTTTTCTTTCTTATAAACTCCTCATCTCCCTTTCCAAATCTCTCCCCCTTCTCTCTCTCCTCTATCCTTATAAAACAACCCATCTCTTTCTCTCTCTCATACAACAAATTCCGACCATGACTTCTCGAGCTAGATTCCTAAAGAGCGTGACATCGCCGCCGTCAACAGGTGCCGAAGCAGACACAGTAGACTCAGATTTCGTGGTAATACTCGCGGCTCTACTCTGCGCTCTCATATGTGTTCTCGGCCTTGTCGCGGTGGCTCGTTGCGCTTGGCTCCGGAGATTCTCGTCATCGGCAGCGTCTCCTCCGGCGGCTGCTAACAAAGGCTTGAAGAAGAAGGTCCTAAAGTCGCTCCCAAAGGTGGCGTATTCAGTCGAACAGCACGCCGGCAAACTCCCGACCGACGAGTGCGCCATTTGCCTGTCGGAATTCGCTGCCGGTGAGGAGATACGTGTCCTACCTCAGTGTGGACACAGCTTCCACGTGTCCTGTATTGACACGTGGCTTGGCTCTCACTCTTCCTGTCCTTCTTGCCGTCAGATCCTGGCCGCCGTGGCCCCCACGCGCTGCCAGAAATGCGGTGGTGGTTTGCCCGAGAGTAGTGGTTGCTCTTCCTCTGTTGGAGCTGGACCTGTTGCTGACTCATCGTTGACGTCATCATCCAGGGTTAGGGATAGTTTCTTACCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_32301.p1 GENE.R_Transcript_32301~~R_Transcript_32301.p1 ORF type:5prime_partial len:242 (+),score=5.17,zf-RING_2|PF13639.2|2.7e-16,zf-RING_11|PF17123.1|5.7e-12,zf-rbx1|PF12678.3|9.9e-10,zf-C3HC4_2|PF13923.2|2e-07,zf-C3HC4_2|PF13923.2|1.5e+04,zf-C3HC4|PF00097.21|5e-07,zf-C3HC4|PF00097.21|1.4e+04,zf-ANAPC11|PF12861.3|1.5e-05,zf-RING_5|PF14634.2|3.1e-06,zf-RING_5|PF14634.2|1.1e+03 R_Transcript_32301:2-727(+)
KKNQLSLLFLPLFLSYKLLISLSKSLPLLSLLYPYKTTHLFLSLIQQIPTMTSRARFLKSVTSPPSTGAEADTVDSDFVVILAALLCALICVLGLVAVARCAWLRRFSSSAASPPAAANKGLKKKVLKSLPKVAYSVEQHAGKLPTDECAICLSEFAAGEEIRVLPQCGHSFHVSCIDTWLGSHSSCPSCRQILAAVAPTRCQKCGGGLPESSGCSSSVGAGPVADSSLTSSSRVRDSFLP*

Click here to download the sequence:
Link to NCBI Protein BLAST